The 2.0 version of rSNPBase

Variant report

Variant rs36116390
Chromosome Location chr2:184059952-184059953
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:184015000-184062000 Weak transcription Small Intestine intestine
2 chr2:184029200-184062800 Weak transcription Rectal Smooth Muscle rectum
3 chr2:184044000-184063000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr2:184044400-184071600 Weak transcription NH-A brain
5 chr2:184047800-184078400 Weak transcription Colon Smooth Muscle Colon
6 chr2:184048800-184071800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr2:184049000-184062200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr2:184049000-184072000 Weak transcription Muscle Satellite Cultured Cells --
9 chr2:184049000-184072600 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr2:184049000-184078000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr2:184049400-184062600 Weak transcription HMEC breast
12 chr2:184050400-184091600 Weak transcription Psoas Muscle Psoas
13 chr2:184050600-184060800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr2:184050600-184066000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr2:184050600-184071400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:184050800-184062400 Weak transcription Brain Hippocampus Middle brain
17 chr2:184051400-184062600 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr2:184052400-184060200 Weak transcription Fetal Muscle Leg muscle
19 chr2:184052400-184066200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr2:184052400-184071400 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:184052400-184071400 Weak transcription Aorta Aorta
22 chr2:184053000-184070200 Weak transcription Brain Germinal Matrix brain
23 chr2:184053000-184072000 Weak transcription Left Ventricle heart
24 chr2:184053000-184074200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr2:184053200-184060000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr2:184053200-184076000 Weak transcription Pancreas Pancrea
27 chr2:184053800-184062200 Weak transcription Fetal Intestine Small intestine
28 chr2:184053800-184064000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr2:184053800-184067400 Weak transcription Fetal Muscle Trunk muscle
30 chr2:184054000-184060000 Weak transcription Duodenum Mucosa Duodenum
31 chr2:184054000-184060600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr2:184054000-184070600 Weak transcription HepG2 liver
33 chr2:184054000-184071800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:184054000-184076200 Weak transcription Primary B cells from cord blood blood
35 chr2:184054200-184060600 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr2:184054600-184062400 Weak transcription Ovary ovary
37 chr2:184054600-184067600 Weak transcription Primary hematopoietic stem cells blood
38 chr2:184055000-184069200 Weak transcription Liver Liver
39 chr2:184055600-184071600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr2:184055600-184076400 Weak transcription Primary T cells from cord blood blood
41 chr2:184055800-184062000 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr2:184056200-184062400 Weak transcription Adipose Nuclei Adipose
43 chr2:184056400-184062000 Weak transcription HSMM muscle
44 chr2:184056400-184065200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr2:184056600-184062400 Weak transcription NHEK skin
46 chr2:184056600-184069200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
47 chr2:184056600-184069800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr2:184056800-184060600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr2:184056800-184061800 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:184056800-184062400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015