Variant report

Variant	rs363297
Chromosome Location	chr10:119046370-119046371
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:119045547..119047705-chr10:119048465..119050984,2	K562	blood:

rs_ID	r²[population]
rs3026068	1.00[AFR][1000 genomes]
rs363286	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs363288	0.96[AFR][1000 genomes]
rs363290	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs363292	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs55698419	0.83[AFR][1000 genomes]
rs56311829	0.91[AFR][1000 genomes]
rs56382679	0.91[AFR][1000 genomes]
rs56962759	0.83[AFR][1000 genomes]
rs57112183	0.83[AFR][1000 genomes]
rs58653554	0.83[AFR][1000 genomes]
rs59381469	0.83[AFR][1000 genomes]
rs59858809	0.83[AFR][1000 genomes]
rs59968623	0.83[AFR][1000 genomes]
rs61515506	0.83[AFR][1000 genomes]
rs74159162	1.00[AFR][1000 genomes]
rs74159163	1.00[AFR][1000 genomes]
rs74159181	0.83[AFR][1000 genomes]
rs74159182	0.83[AFR][1000 genomes]
rs74159183	0.83[AFR][1000 genomes]
rs74159193	0.83[AFR][1000 genomes]
rs74159195	0.83[AFR][1000 genomes]
rs74159196	0.83[AFR][1000 genomes]
rs74159198	0.83[AFR][1000 genomes]
rs74159199	0.83[AFR][1000 genomes]
rs74162306	0.82[AFR][1000 genomes]

Chromatin state (count:118 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119032000-119050600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr10:119032400-119051000	Weak transcription	Ovary	ovary
3	chr10:119032600-119063200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr10:119035400-119058000	Weak transcription	Small Intestine	intestine
5	chr10:119038800-119050000	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr10:119040400-119050200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:119040800-119050600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:119041000-119050000	Strong transcription	Primary neutrophils fromperipheralblood	blood
9	chr10:119041200-119050000	Strong transcription	Liver	Liver
10	chr10:119041200-119051000	Weak transcription	Right Ventricle	heart
11	chr10:119041400-119101200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
12	chr10:119041800-119071600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr10:119042000-119050000	Strong transcription	Fetal Intestine Large	intestine
14	chr10:119042000-119053200	Weak transcription	Colonic Mucosa	Colon
15	chr10:119042200-119046400	Strong transcription	Duodenum Mucosa	Duodenum
16	chr10:119042200-119064200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
17	chr10:119042600-119046400	Strong transcription	Sigmoid Colon	Sigmoid Colon
18	chr10:119042600-119046600	Strong transcription	Primary T helper cells PMA-I stimulated	--
19	chr10:119042600-119046600	Strong transcription	HMEC	breast
20	chr10:119042600-119047200	Strong transcription	Rectal Mucosa Donor 29	rectum
21	chr10:119042600-119047800	Strong transcription	Primary hematopoietic stem cells	blood
22	chr10:119042600-119049800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr10:119042600-119049800	Strong transcription	HepG2	liver
24	chr10:119042600-119050000	Strong transcription	Rectal Mucosa Donor 31	rectum
25	chr10:119042800-119046400	Strong transcription	Primary B cells from cord blood	blood
26	chr10:119042800-119046600	Strong transcription	K562	blood
27	chr10:119042800-119050000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr10:119042800-119050600	Strong transcription	Dnd41	blood
29	chr10:119042800-119051400	Weak transcription	Brain Germinal Matrix	brain
30	chr10:119043000-119046400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr10:119043000-119046400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr10:119043000-119046800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
33	chr10:119043000-119050000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
34	chr10:119043000-119050200	Strong transcription	A549	lung
35	chr10:119043000-119069400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
36	chr10:119043000-119094400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr10:119043200-119047000	Strong transcription	Primary T cells fromperipheralblood	blood
38	chr10:119043200-119049600	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr10:119043400-119046400	Strong transcription	Primary T helper cells fromperipheralblood	blood
40	chr10:119043400-119047200	Genic enhancers	Primary T cells from cord blood	blood
41	chr10:119043400-119056800	Weak transcription	Brain Substantia Nigra	brain
42	chr10:119043400-119065600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
43	chr10:119044000-119046400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
44	chr10:119044600-119048600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr10:119044600-119048800	Weak transcription	Rectal Smooth Muscle	rectum
46	chr10:119044600-119048800	Weak transcription	Stomach Mucosa	stomach
47	chr10:119044600-119050400	Weak transcription	Fetal Brain Female	brain
48	chr10:119044600-119050600	Weak transcription	Psoas Muscle	Psoas
49	chr10:119044600-119050800	Weak transcription	Fetal Brain Male	brain
50	chr10:119044600-119051200	Weak transcription	Skeletal Muscle Male	skeletal muscle

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