Variant report

Variant	rs36379
Chromosome Location	chr14:72371701-72371702
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs36374	1.00[AFR][1000 genomes]
rs36400	1.00[AFR][1000 genomes]
rs36402	1.00[AFR][1000 genomes]
rs36407	1.00[AFR][1000 genomes]
rs36414	1.00[AFR][1000 genomes]
rs36417	1.00[AFR][1000 genomes]
rs36419	1.00[AFR][1000 genomes]
rs36421	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3398985	chr14:71927884-72404676	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1035695	chr14:72323819-72383610	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1345	chr14:72349589-72395819	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72370400-72372600	Weak transcription	Spleen	Spleen
2	chr14:72371200-72373000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr14:72371600-72371800	Enhancers	Fetal Lung	lung
4	chr14:72371600-72372000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:72371600-72372400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:72371600-72373200	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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