Variant report

Variant	rs36400
Chromosome Location	chr14:72359993-72359994
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 65 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs1009018	1.00[ASN][1000 genomes]
rs17768054	1.00[ASN][1000 genomes]
rs2190874	1.00[ASN][1000 genomes]
rs2215133	1.00[ASN][1000 genomes]
rs2877773	1.00[ASN][1000 genomes]
rs36319	1.00[ASN][1000 genomes]
rs36320	1.00[ASN][1000 genomes]
rs36322	1.00[ASN][1000 genomes]
rs36323	1.00[ASN][1000 genomes]
rs36324	1.00[ASN][1000 genomes]
rs36325	1.00[ASN][1000 genomes]
rs36328	1.00[ASN][1000 genomes]
rs36329	1.00[ASN][1000 genomes]
rs36330	1.00[ASN][1000 genomes]
rs36331	1.00[ASN][1000 genomes]
rs36333	1.00[ASN][1000 genomes]
rs36334	1.00[ASN][1000 genomes]
rs36337	1.00[ASN][1000 genomes]
rs36338	1.00[ASN][1000 genomes]
rs36339	1.00[ASN][1000 genomes]
rs36342	1.00[ASN][1000 genomes]
rs36346	1.00[ASN][1000 genomes]
rs36347	1.00[ASN][1000 genomes]
rs36348	1.00[ASN][1000 genomes]
rs36349	1.00[ASN][1000 genomes]
rs36352	1.00[ASN][1000 genomes]
rs36353	1.00[ASN][1000 genomes]
rs36354	1.00[ASN][1000 genomes]
rs36355	1.00[ASN][1000 genomes]
rs36359	1.00[ASN][1000 genomes]
rs36362	1.00[ASN][1000 genomes]
rs36364	1.00[ASN][1000 genomes]
rs36365	1.00[ASN][1000 genomes]
rs36367	1.00[ASN][1000 genomes]
rs36371	1.00[ASN][1000 genomes]
rs36374	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36379	1.00[AFR][1000 genomes]
rs36402	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36407	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36413	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36417	1.00[AFR][1000 genomes]
rs36419	1.00[AFR][1000 genomes]
rs36421	1.00[AFR][1000 genomes]
rs4243639	1.00[ASN][1000 genomes]
rs4598834	1.00[ASN][1000 genomes]
rs4899406	1.00[ASN][1000 genomes]
rs4899408	1.00[ASN][1000 genomes]
rs4902959	1.00[ASN][1000 genomes]
rs4902962	1.00[ASN][1000 genomes]
rs61996396	1.00[ASN][1000 genomes]
rs6574036	1.00[ASN][1000 genomes]
rs722975	1.00[ASN][1000 genomes]
rs728494	1.00[ASN][1000 genomes]
rs728495	1.00[ASN][1000 genomes]
rs728498	1.00[ASN][1000 genomes]
rs758236	1.00[ASN][1000 genomes]
rs8011972	1.00[ASN][1000 genomes]
rs8014500	1.00[ASN][1000 genomes]
rs917392	1.00[ASN][1000 genomes]
rs991890	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3398985	chr14:71927884-72404676	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
3	nsv1035695	chr14:72323819-72383610	Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1345	chr14:72349589-72395819	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72357800-72360600	Enhancers	H9 Cell Line	embryonic stem cell
2	chr14:72358000-72360200	Enhancers	H1 Cell Line	embryonic stem cell
3	chr14:72358000-72360200	Enhancers	HUES64 Cell Line	embryonic stem cell
4	chr14:72358000-72360200	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr14:72359200-72360400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr14:72359400-72360400	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr14:72359400-72360600	Enhancers	ES-I3 Cell Line	embryonic stem cell

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