Variant report

Variant	rs367959075
Chromosome Location	chr12:10398208-10398209
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898757	chr12:10229281-10614641	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv1054811	chr12:10350587-10440005	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv832328	chr12:10398071-10620443	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:10377200-10399000	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr12:10377800-10404400	Weak transcription	Left Ventricle	heart
3	chr12:10395800-10402400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr12:10396800-10398800	Strong transcription	Placenta	Placenta
5	chr12:10396800-10400200	Weak transcription	Right Atrium	heart
6	chr12:10397000-10398600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr12:10397200-10399600	Weak transcription	GM12878-XiMat	blood
8	chr12:10397200-10400200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr12:10397200-10400200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
10	chr12:10397200-10400200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr12:10397200-10401800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr12:10397200-10402200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr12:10397200-10402400	Weak transcription	Primary hematopoietic stem cells	blood
14	chr12:10397200-10402400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
15	chr12:10397200-10402400	Weak transcription	Dnd41	blood
16	chr12:10397200-10403000	Weak transcription	Primary T cells fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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