Variant report

Variant	rs368231291
Chromosome Location	chr6:80817007-80817008
allele	-/ATAT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:80816628..80819022-chr6:80824130..80826174,2	K562	blood:
2	chr6:80815077..80817880-chr6:80835991..80839240,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000083123	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3398521	chr6:80816133-80818281	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:80815200-80817400	Active TSS	Fetal Kidney	kidney
2	chr6:80815400-80817400	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr6:80815600-80817200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr6:80815600-80817200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:80815600-80817200	Active TSS	Brain Hippocampus Middle	brain
6	chr6:80815600-80817200	Active TSS	Brain Inferior Temporal Lobe	brain
7	chr6:80815600-80817200	Active TSS	Duodenum Smooth Muscle	Duodenum
8	chr6:80815600-80817400	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr6:80815600-80817400	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr6:80815600-80817400	Active TSS	Fetal Intestine Large	intestine
11	chr6:80815600-80817400	Active TSS	Rectal Mucosa Donor 29	rectum
12	chr6:80815600-80817400	Active TSS	K562	blood
13	chr6:80815600-80817800	Active TSS	HUES64 Cell Line	embryonic stem cell
14	chr6:80815600-80817800	Active TSS	Stomach Smooth Muscle	stomach
15	chr6:80815600-80819200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr6:80815800-80817200	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
17	chr6:80815800-80817200	Active TSS	Brain Anterior Caudate	brain
18	chr6:80815800-80817200	Active TSS	Brain Substantia Nigra	brain
19	chr6:80815800-80817200	Active TSS	Hela-S3	cervix
20	chr6:80815800-80817400	Active TSS	ES-I3 Cell Line	embryonic stem cell
21	chr6:80815800-80817400	Active TSS	H9 Cell Line	embryonic stem cell
22	chr6:80815800-80817400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr6:80815800-80817400	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr6:80815800-80817400	Active TSS	iPS-18 Cell Line	embryonic stem cell
25	chr6:80815800-80817400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr6:80815800-80817400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr6:80815800-80817400	Active TSS	Primary T killer memory cells from peripheral blood	blood
28	chr6:80815800-80817400	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr6:80815800-80817400	Active TSS	Right Ventricle	heart
30	chr6:80815800-80817400	Active TSS	HMEC	breast
31	chr6:80815800-80817400	Active TSS	NHLF	lung
32	chr6:80815800-80817600	Active TSS	Aorta	Aorta
33	chr6:80815800-80817800	Active TSS	HUES48 Cell Line	embryonic stem cell
34	chr6:80815800-80817800	Active TSS	HUES6 Cell Line	embryonic stem cell
35	chr6:80815800-80817800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
36	chr6:80815800-80817800	Active TSS	GM12878-XiMat	blood
37	chr6:80815800-80818000	Active TSS	H1 Cell Line	embryonic stem cell
38	chr6:80816000-80817400	Active TSS	iPS-15b Cell Line	embryonic stem cell
39	chr6:80816000-80817400	Active TSS	iPS-20b Cell Line	embryonic stem cell
40	chr6:80816000-80817400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr6:80816000-80817400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr6:80816000-80817400	Active TSS	Muscle Satellite Cultured Cells	--
43	chr6:80816000-80817400	Active TSS	Fetal Lung	lung
44	chr6:80816000-80817400	Active TSS	NHDF-Ad	bronchial
45	chr6:80816600-80817800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr6:80816800-80817400	Weak transcription	Small Intestine	intestine
47	chr6:80816800-80836000	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr6:80817000-80817200	Flanking Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr6:80817000-80817200	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr6:80817000-80817200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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