Variant report

Variant	rs368798605
Chromosome Location	chr14:65929521-65929522
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1036403	chr14:65724229-66208114	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
2	nsv1043943	chr14:65782466-66698411	Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	55 gene(s)	inside rSNPs	diseases
3	nsv542120	chr14:65782466-66698411	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	55 gene(s)	inside rSNPs	diseases
4	nsv1039168	chr14:65811750-66308343	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	35 gene(s)	inside rSNPs	diseases
5	esv3366524	chr14:65924360-66423862	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
6	nsv976347	chr14:65929311-65939441	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65892800-65929600	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr14:65898400-65935600	Weak transcription	Gastric	stomach
3	chr14:65905800-65936600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr14:65911200-65942400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr14:65913800-65942400	Weak transcription	Left Ventricle	heart
6	chr14:65917200-65936600	Weak transcription	Pancreas	Pancrea
7	chr14:65918600-65935600	Weak transcription	Fetal Stomach	stomach
8	chr14:65920400-65937800	Weak transcription	Ovary	ovary
9	chr14:65920800-65942400	Weak transcription	Stomach Mucosa	stomach
10	chr14:65922200-65936400	Weak transcription	Placenta	Placenta
11	chr14:65923200-65934800	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr14:65923200-65936000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
13	chr14:65923200-65938200	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr14:65923400-65935800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr14:65923400-65937000	Weak transcription	Brain Germinal Matrix	brain
16	chr14:65923400-65938000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
17	chr14:65923400-65945000	Weak transcription	NHDF-Ad	bronchial
18	chr14:65924000-65937600	Weak transcription	Fetal Brain Female	brain
19	chr14:65924200-65936600	Weak transcription	Lung	lung
20	chr14:65924400-65930200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr14:65924400-65935400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr14:65924600-65935400	Weak transcription	Fetal Intestine Small	intestine
23	chr14:65925200-65936000	Weak transcription	HUES64 Cell Line	embryonic stem cell
24	chr14:65925600-65931600	Strong transcription	Dnd41	blood
25	chr14:65925800-65943200	Weak transcription	Thymus	Thymus
26	chr14:65926000-65938200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr14:65927400-65930400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
28	chr14:65927600-65934800	Weak transcription	Fetal Lung	lung
29	chr14:65927600-65935400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr14:65927600-65936600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr14:65927600-65936600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr14:65927800-65929800	Enhancers	HMEC	breast
33	chr14:65928000-65929800	Enhancers	Primary hematopoietic stem cells short term culture	blood
34	chr14:65928000-65929800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr14:65928000-65929800	Flanking Active TSS	GM12878-XiMat	blood
36	chr14:65928000-65929800	Enhancers	Osteobl	bone
37	chr14:65928000-65930200	Weak transcription	Rectal Mucosa Donor 29	rectum
38	chr14:65928000-65930400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr14:65928000-65936200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
40	chr14:65928200-65929600	Enhancers	Primary B cells from peripheral blood	blood
41	chr14:65928200-65929600	Enhancers	Brain Cingulate Gyrus	brain
42	chr14:65928200-65929800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr14:65928200-65929800	Enhancers	Muscle Satellite Cultured Cells	--
44	chr14:65928200-65929800	Enhancers	NH-A	brain
45	chr14:65928200-65930200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr14:65928200-65936400	Weak transcription	Primary T cells fromperipheralblood	blood
47	chr14:65928200-65936400	Weak transcription	Fetal Intestine Large	intestine
48	chr14:65928400-65929800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr14:65928400-65929800	Enhancers	HSMM	muscle
50	chr14:65928400-65930200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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