Variant report

Variant	rs371251080
Chromosome Location	chr16:80626592-80626593
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:80622034..80624182-chr16:80626322..80628140,2	MCF-7	breast:
2	chr16:80620426..80622988-chr16:80624627..80626821,2	MCF-7	breast:
3	chr16:80623692..80626755-chr16:80631234..80633032,3	MCF-7	breast:
4	chr16:80625101..80626775-chr16:80839502..80841949,2	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1060621	chr16:80532848-80980616	Weak transcription Active TSS ZNF genes & repeats Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
2	nsv542989	chr16:80532848-80980616	Enhancers Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
3	esv3442318	chr16:80626351-80628649	Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80619200-80632600	Weak transcription	Hela-S3	cervix
2	chr16:80621200-80628200	Weak transcription	Placenta	Placenta
3	chr16:80624400-80626600	Enhancers	Primary hematopoietic stem cells	blood
4	chr16:80624800-80626600	Weak transcription	Right Ventricle	heart
5	chr16:80624800-80626600	Enhancers	Thymus	Thymus
6	chr16:80625400-80626600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr16:80625400-80645600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr16:80625600-80626600	Enhancers	Primary T cells from cord blood	blood
9	chr16:80625600-80626600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
10	chr16:80625600-80626600	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr16:80625600-80626600	Enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr16:80625600-80636000	Weak transcription	Duodenum Mucosa	Duodenum
13	chr16:80625600-80637800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
14	chr16:80625800-80626800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
15	chr16:80626000-80626800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr16:80626000-80639800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
17	chr16:80626200-80626600	Enhancers	Liver	Liver
18	chr16:80626200-80637800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr16:80626200-80640000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr16:80626200-80640000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr16:80626400-80636800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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