| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1013008 |
chr1:78463173-78958701 |
Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
72 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv535012 |
chr1:78463173-78958701 |
Enhancers Genic enhancers Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
72 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv871835 |
chr1:78528803-79501129 |
Flanking Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv482697 |
chr1:78786028-78935333 |
Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv870807 |
chr1:78867347-79032598 |
Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionmiRNA target site
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv3434125 |
chr1:78872980-78890985 |
Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
