Variant report

Variant	rs371999567
Chromosome Location	chr1:210827264-210827265
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:210324019..210326908-chr1:210824141..210827661,3	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873148	chr1:210665583-210994339	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	3 gene(s)	inside rSNPs	diseases
2	nsv522480	chr1:210779936-210848344	Weak transcription Enhancers ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
3	esv1825229	chr1:210789477-210854976	Enhancers ZNF genes & repeats Weak transcription Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
4	nsv873150	chr1:210808270-210893233	Enhancers Weak transcription ZNF genes & repeats Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
5	nsv873151	chr1:210818347-210846888	Enhancers ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv873152	chr1:210820285-210854815	Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA miRNA target site	n/a	inside rSNPs	diseases
7	esv3348452	chr1:210827024-210827384	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3353042	chr1:210827036-210827589	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3370083	chr1:210827196-210827546	Flanking Bivalent TSS/Enh ZNF genes & repeats Weak transcription Bivalent Enhancer Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3401732	chr1:210827208-210827521	ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:210821400-210837000	Weak transcription	Left Ventricle	heart
2	chr1:210823800-210828400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr1:210824200-210830000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr1:210827000-210827400	ZNF genes & repeats	HepG2	liver
5	chr1:210827000-210827600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
6	chr1:210827000-210827600	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr1:210827000-210827600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr1:210827000-210827600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr1:210827000-210827600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
10	chr1:210827000-210827600	ZNF genes & repeats	Gastric	stomach
11	chr1:210827000-210827600	ZNF genes & repeats	Pancreas	Pancrea
12	chr1:210827000-210827600	ZNF genes & repeats	A549	lung
13	chr1:210827000-210827600	ZNF genes & repeats	NHLF	lung
14	chr1:210827000-210827800	ZNF genes & repeats	Spleen	Spleen
15	chr1:210827200-210827400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
16	chr1:210827200-210827400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
17	chr1:210827200-210827400	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
18	chr1:210827200-210827400	ZNF genes & repeats	Primary T cells from cord blood	blood
19	chr1:210827200-210827400	ZNF genes & repeats	Primary T cells fromperipheralblood	blood
20	chr1:210827200-210827400	ZNF genes & repeats	Primary hematopoietic stem cells	blood
21	chr1:210827200-210827400	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
22	chr1:210827200-210827400	ZNF genes & repeats	Aorta	Aorta
23	chr1:210827200-210827400	ZNF genes & repeats	Colon Smooth Muscle	Colon
24	chr1:210827200-210827400	ZNF genes & repeats	Ovary	ovary
25	chr1:210827200-210827400	Bivalent Enhancer	Psoas Muscle	Psoas
26	chr1:210827200-210827400	ZNF genes & repeats	Right Ventricle	heart
27	chr1:210827200-210827400	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
28	chr1:210827200-210827400	ZNF genes & repeats	HUVEC	blood vessel
29	chr1:210827200-210827600	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr1:210827200-210827600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr1:210827200-210827600	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr1:210827200-210827600	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
33	chr1:210827200-210827600	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr1:210827200-210827600	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
35	chr1:210827200-210827600	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr1:210827200-210827600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
37	chr1:210827200-210827600	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr1:210827200-210827600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
39	chr1:210827200-210827600	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
40	chr1:210827200-210827600	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
41	chr1:210827200-210827600	Flanking Bivalent TSS/Enh	Adipose Nuclei	Adipose
42	chr1:210827200-210827600	ZNF genes & repeats	Liver	Liver
43	chr1:210827200-210827600	ZNF genes & repeats	Brain Angular Gyrus	brain
44	chr1:210827200-210827600	ZNF genes & repeats	Brain Anterior Caudate	brain
45	chr1:210827200-210827600	ZNF genes & repeats	Brain Cingulate Gyrus	brain
46	chr1:210827200-210827600	ZNF genes & repeats	Brain Hippocampus Middle	brain
47	chr1:210827200-210827600	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
48	chr1:210827200-210827600	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
49	chr1:210827200-210827600	ZNF genes & repeats	Brain Substantia Nigra	brain
50	chr1:210827200-210827600	ZNF genes & repeats	Esophagus	oesophagus

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