Variant report

Variant	rs372581
Chromosome Location	chr9:70975096-70975097
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs265081	1.00[JPT][hapmap]
rs418315	1.00[YRI][hapmap]
rs424970	1.00[JPT][hapmap]
rs6560175	1.00[JPT][hapmap]
rs7849742	1.00[JPT][hapmap]
rs7864227	1.00[JPT][hapmap]
rs7870459	1.00[YRI][hapmap]
rs902949	1.00[JPT][hapmap]
rs928049	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427847	chr9:70318730-71153527	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:70972200-71010600	Weak transcription	Aorta	Aorta
2	chr9:70973200-70982000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr9:70973400-70990000	Weak transcription	Right Ventricle	heart
4	chr9:70973400-71006600	Weak transcription	Left Ventricle	heart
5	chr9:70974000-70979000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr9:70974000-70982000	Weak transcription	Rectal Smooth Muscle	rectum
7	chr9:70974200-70979000	Weak transcription	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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