Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10448011	0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10504069	0.95[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs12056729	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12550346	0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12674652	0.90[EUR][1000 genomes]
rs13248468	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13250382	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13278300	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16939396	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16939398	0.98[EUR][1000 genomes]
rs16939408	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16939444	0.95[EUR][1000 genomes]
rs16939445	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1876718	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2667282	0.83[EUR][1000 genomes]
rs2891720	0.93[EUR][1000 genomes]
rs34381258	0.93[EUR][1000 genomes]
rs4510886	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4873311	0.98[EUR][1000 genomes]
rs4873316	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs59888224	0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1025068	chr8:49953397-50370208	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49983600-49985400	Active TSS	Skeletal Muscle Female	skeletal muscle
2	chr8:49984000-49986400	Active TSS	Skeletal Muscle Male	skeletal muscle
3	chr8:49984400-49985600	Active TSS	Psoas Muscle	Psoas
4	chr8:49984400-49985600	Enhancers	Hela-S3	cervix
5	chr8:49984600-49991400	Weak transcription	K562	blood
6	chr8:49985000-49986400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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