Variant report

Variant	rs373663129
Chromosome Location	chr3:82204100-82204101
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007167	chr3:82050178-82301466	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv877041	chr3:82074024-82363196	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1008429	chr3:82089650-82510536	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv432460	chr3:82107110-82508010	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv1005262	chr3:82165228-82258781	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
6	nsv1013820	chr3:82175705-82968181	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
7	nsv877043	chr3:82198467-82311711	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS	lncRNA	4 gene(s)	inside rSNPs	diseases
8	esv3525900	chr3:82201347-82204489	Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv3464310	chr3:82201368-82204251	Enhancers	n/a	n/a	inside rSNPs	n/a
10	esv3464311	chr3:82201368-82204251	Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv2462862	chr3:82201706-82204426	Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv3335473	chr3:82201727-82204126	Enhancers	n/a	n/a	inside rSNPs	n/a
13	esv3525899	chr3:82201812-82205110	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3523642	chr3:82202312-82205010	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3523643	chr3:82202312-82205010	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
16	nsv590778	chr3:82203303-82204602	Enhancers	n/a	n/a	inside rSNPs	n/a
17	nsv590779	chr3:82203354-82223946	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82203400-82204200	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr3:82203400-82204800	Enhancers	HepG2	liver

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links