Variant report

Variant	rs374071590
Chromosome Location	chr9:21675717-21675718
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029634	chr9:21542970-21765286	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
2	nsv1015623	chr9:21579110-21694039	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
3	nsv892742	chr9:21589041-21707372	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv892743	chr9:21675545-21772064	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:21673000-21679400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr9:21674200-21677600	Enhancers	HMEC	breast
3	chr9:21674200-21678200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr9:21674400-21677600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr9:21674600-21676600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr9:21674600-21677400	Enhancers	NHEK	skin
7	chr9:21674600-21677600	Enhancers	NHDF-Ad	bronchial
8	chr9:21674800-21676800	Enhancers	Hela-S3	cervix
9	chr9:21674800-21677400	Enhancers	HUVEC	blood vessel
10	chr9:21674800-21677600	Enhancers	Muscle Satellite Cultured Cells	--
11	chr9:21675000-21676400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr9:21675000-21677400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr9:21675000-21677600	Enhancers	Osteobl	bone
14	chr9:21675200-21675800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr9:21675200-21676200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr9:21675400-21676600	Enhancers	NHLF	lung
17	chr9:21675400-21676800	Flanking Active TSS	A549	lung
18	chr9:21675600-21677600	Weak transcription	NH-A	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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