| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv547853 |
chr1:152008671-152236760 |
Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
83 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1014095 |
chr1:152104486-152454591 |
Active TSS Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
28 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv946325 |
chr1:152221751-152240196 |
Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS
|
lncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv3372510 |
chr1:152232828-152237226 |
ZNF genes & repeats Weak transcription
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
esv3422049 |
chr1:152234328-152238726 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 6 |
nsv547855 |
chr1:152235044-152240504 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 7 |
nsv547856 |
chr1:152235044-152251714 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 8 |
nsv547857 |
chr1:152235564-152240504 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015