The 2.0 version of rSNPBase

Variant report

Variant rs374666830
Chromosome Location chr6:80816918-80816919
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:80815200-80817400 Active TSS Fetal Kidney kidney
2 chr6:80815400-80817400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:80815600-80817000 Active TSS Brain Cingulate Gyrus brain
4 chr6:80815600-80817000 Active TSS Pancreatic Islets Pancreatic Islet
5 chr6:80815600-80817000 Active TSS Right Atrium heart
6 chr6:80815600-80817000 Active TSS A549 lung
7 chr6:80815600-80817200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr6:80815600-80817200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:80815600-80817200 Active TSS Brain Hippocampus Middle brain
10 chr6:80815600-80817200 Active TSS Brain Inferior Temporal Lobe brain
11 chr6:80815600-80817200 Active TSS Duodenum Smooth Muscle Duodenum
12 chr6:80815600-80817400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
13 chr6:80815600-80817400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:80815600-80817400 Active TSS Fetal Intestine Large intestine
15 chr6:80815600-80817400 Active TSS Rectal Mucosa Donor 29 rectum
16 chr6:80815600-80817400 Active TSS K562 blood
17 chr6:80815600-80817800 Active TSS HUES64 Cell Line embryonic stem cell
18 chr6:80815600-80817800 Active TSS Stomach Smooth Muscle stomach
19 chr6:80815600-80819200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr6:80815800-80817000 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr6:80815800-80817000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
22 chr6:80815800-80817000 Active TSS Primary T killer naive cells fromperipheralblood blood
23 chr6:80815800-80817000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:80815800-80817000 Active TSS Brain Germinal Matrix brain
25 chr6:80815800-80817000 Active TSS Colon Smooth Muscle Colon
26 chr6:80815800-80817000 Active TSS Ovary ovary
27 chr6:80815800-80817000 Active TSS Placenta Amnion Placenta Amnion
28 chr6:80815800-80817000 Active TSS Psoas Muscle Psoas
29 chr6:80815800-80817000 Active TSS HSMMtube muscle
30 chr6:80815800-80817000 Active TSS NHEK skin
31 chr6:80815800-80817000 Active TSS Osteobl bone
32 chr6:80815800-80817200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
33 chr6:80815800-80817200 Active TSS Brain Anterior Caudate brain
34 chr6:80815800-80817200 Active TSS Brain Substantia Nigra brain
35 chr6:80815800-80817200 Active TSS Hela-S3 cervix
36 chr6:80815800-80817400 Active TSS ES-I3 Cell Line embryonic stem cell
37 chr6:80815800-80817400 Active TSS H9 Cell Line embryonic stem cell
38 chr6:80815800-80817400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:80815800-80817400 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:80815800-80817400 Active TSS iPS-18 Cell Line embryonic stem cell
41 chr6:80815800-80817400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr6:80815800-80817400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr6:80815800-80817400 Active TSS Primary T killer memory cells from peripheral blood blood
44 chr6:80815800-80817400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
45 chr6:80815800-80817400 Active TSS Right Ventricle heart
46 chr6:80815800-80817400 Active TSS HMEC breast
47 chr6:80815800-80817400 Active TSS NHLF lung
48 chr6:80815800-80817600 Active TSS Aorta Aorta
49 chr6:80815800-80817800 Active TSS HUES48 Cell Line embryonic stem cell
50 chr6:80815800-80817800 Active TSS HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015