The 2.0 version of rSNPBase

Variant report

Variant rs3754740
Chromosome Location chr2:174062595-174062596
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:174026000-174069000 Weak transcription Primary B cells from cord blood blood
2 chr2:174026600-174083200 Weak transcription Esophagus oesophagus
3 chr2:174046400-174075800 Weak transcription Duodenum Mucosa Duodenum
4 chr2:174047000-174062800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr2:174047600-174062800 Weak transcription GM12878-XiMat blood
6 chr2:174047800-174065800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr2:174048600-174095200 Weak transcription Thymus Thymus
8 chr2:174049000-174070600 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:174049200-174070200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:174049200-174083200 Weak transcription Small Intestine intestine
11 chr2:174049400-174078200 Weak transcription HUVEC blood vessel
12 chr2:174049600-174062800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr2:174049600-174074400 Weak transcription Fetal Stomach stomach
14 chr2:174049600-174079800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:174049800-174062600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr2:174050200-174062800 Weak transcription HepG2 liver
17 chr2:174051600-174065200 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr2:174052000-174063000 Weak transcription Placenta Placenta
19 chr2:174052800-174063200 Weak transcription Primary B cells from peripheral blood blood
20 chr2:174053000-174065400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr2:174053400-174062800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:174053400-174072000 Weak transcription Right Atrium heart
23 chr2:174053400-174075600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr2:174053400-174078400 Weak transcription Gastric stomach
25 chr2:174053400-174082000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:174053400-174089800 Weak transcription Pancreas Pancrea
27 chr2:174053600-174062800 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr2:174054800-174062800 Weak transcription Fetal Muscle Trunk muscle
29 chr2:174055000-174065000 Weak transcription Primary T cells from cord blood blood
30 chr2:174055400-174064800 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr2:174056400-174062800 Weak transcription K562 blood
32 chr2:174056400-174063000 Weak transcription Fetal Thymus thymus
33 chr2:174056600-174065600 Weak transcription Muscle Satellite Cultured Cells --
34 chr2:174056800-174062800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr2:174056800-174062800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr2:174056800-174062800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:174056800-174063000 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:174057400-174075800 Weak transcription Hela-S3 cervix
39 chr2:174058000-174062800 Weak transcription Adipose Nuclei Adipose
40 chr2:174058000-174062800 Weak transcription Fetal Muscle Leg muscle
41 chr2:174058000-174063000 Weak transcription NHEK skin
42 chr2:174058000-174112800 Weak transcription Spleen Spleen
43 chr2:174058400-174062800 Weak transcription Liver Liver
44 chr2:174058400-174062800 Weak transcription Dnd41 blood
45 chr2:174058800-174062800 Weak transcription HSMM muscle
46 chr2:174059000-174062800 Weak transcription Fetal Lung lung
47 chr2:174059000-174075000 Weak transcription NHLF lung
48 chr2:174059200-174062800 Weak transcription HMEC breast
49 chr2:174059200-174063200 Weak transcription NH-A brain
50 chr2:174059400-174062800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015