The 2.0 version of rSNPBase

Variant report

Variant rs375509104
Chromosome Location chr2:181939349-181939350
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181904400-181945400 Weak transcription Left Ventricle heart
2 chr2:181911800-181940400 Weak transcription Primary T cells from cord blood blood
3 chr2:181912400-181941400 Weak transcription Esophagus oesophagus
4 chr2:181920800-181949800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr2:181922000-181942400 Weak transcription Fetal Intestine Large intestine
6 chr2:181926200-181939600 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr2:181928600-181942200 Weak transcription Dnd41 blood
8 chr2:181928600-181943000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr2:181929000-181940400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:181929000-181942200 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr2:181930800-181942200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr2:181932000-181940600 Weak transcription Primary B cells from cord blood blood
13 chr2:181932200-181942600 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr2:181934400-181940000 Enhancers HUVEC blood vessel
15 chr2:181934800-181947800 Weak transcription Ovary ovary
16 chr2:181935000-181948000 Weak transcription Small Intestine intestine
17 chr2:181935200-181941200 Weak transcription Fetal Stomach stomach
18 chr2:181935400-181941800 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr2:181935400-181942600 Weak transcription A549 lung
20 chr2:181935600-181942400 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr2:181935600-181943600 Weak transcription Fetal Heart heart
22 chr2:181935600-181946200 Weak transcription Primary hematopoietic stem cells blood
23 chr2:181936800-181942000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:181937000-181939400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr2:181937000-181939800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr2:181937200-181939600 Enhancers HMEC breast
27 chr2:181937200-181939800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:181937200-181941000 Enhancers NHEK skin
29 chr2:181937400-181945600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:181937600-181941200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:181937600-181942200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:181937800-181939800 Weak transcription Right Ventricle heart
33 chr2:181937800-181942000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:181937800-181949600 Weak transcription HSMMtube muscle
35 chr2:181938200-181939600 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr2:181938200-181939600 Enhancers Muscle Satellite Cultured Cells --
37 chr2:181938200-181939800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:181938200-181940400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr2:181938400-181954800 Weak transcription Psoas Muscle Psoas
40 chr2:181938600-181939600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr2:181938800-181939400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr2:181938800-181939400 Enhancers HSMM muscle
43 chr2:181938800-181941600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr2:181938800-181941800 Weak transcription NHLF lung
45 chr2:181939000-181939400 Weak transcription NHDF-Ad bronchial
46 chr2:181939000-181941000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:181939200-181939600 Enhancers Fetal Brain Male brain
48 chr2:181939200-181940400 Weak transcription Osteobl bone
49 chr2:181939200-181942200 Weak transcription NH-A brain

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Last update: Aug 31, 2015