Variant report

Variant	rs3770763
Chromosome Location	chr2:37500471-37500472
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:37493948..37499584-chr2:37500018..37504344,8	K562	blood:

Variant related genes	Relation type
ENSG00000115825	Chromatin interaction

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10198835	0.85[CEU][hapmap]
rs11124576	0.85[CEU][hapmap];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11689186	0.85[CEU][hapmap];0.83[EUR][1000 genomes]
rs12622740	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs12712528	0.88[CHB][hapmap]
rs17409947	0.93[CEU][hapmap];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17481834	0.93[CEU][hapmap];0.96[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2110963	0.85[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2160394	0.92[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2300884	0.80[CEU][hapmap]
rs2300885	0.85[CEU][hapmap];0.94[CHB][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2300892	0.85[CEU][hapmap];0.94[CHB][hapmap];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2302650	0.86[CEU][hapmap];0.94[CHB][hapmap];0.92[JPT][hapmap];0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2302653	0.84[AFR][1000 genomes]
rs2888463	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs3819892	0.93[CEU][hapmap];0.85[JPT][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4670192	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs55991517	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs56059107	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56059847	0.82[ASN][1000 genomes]
rs59262093	0.81[ASN][1000 genomes]
rs61208496	0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6726709	0.85[CEU][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6743961	0.89[CHB][hapmap]
rs72792821	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72792835	0.89[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs876461	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9318	0.92[CEU][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37460000-37501600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:37460200-37528600	Weak transcription	Stomach Mucosa	stomach
3	chr2:37461200-37518800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr2:37463400-37509600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr2:37467600-37530200	Weak transcription	Pancreas	Pancrea
6	chr2:37470400-37521600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr2:37470800-37521400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr2:37476800-37501400	Weak transcription	Esophagus	oesophagus
9	chr2:37477400-37502200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
10	chr2:37479400-37520600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr2:37479800-37501600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
12	chr2:37480600-37505000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
13	chr2:37481600-37500800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr2:37482600-37501800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr2:37482800-37528600	Weak transcription	Brain Cingulate Gyrus	brain
16	chr2:37484200-37501600	Weak transcription	K562	blood
17	chr2:37484200-37539000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
18	chr2:37484400-37511600	Weak transcription	Fetal Brain Male	brain
19	chr2:37484600-37501400	Weak transcription	Colonic Mucosa	Colon
20	chr2:37484600-37550400	Weak transcription	Right Ventricle	heart
21	chr2:37486200-37501600	Weak transcription	Brain Inferior Temporal Lobe	brain
22	chr2:37486400-37501200	Weak transcription	Psoas Muscle	Psoas
23	chr2:37487200-37528600	Weak transcription	Brain Substantia Nigra	brain
24	chr2:37487600-37521200	Weak transcription	Brain Angular Gyrus	brain
25	chr2:37490400-37503400	Strong transcription	Liver	Liver
26	chr2:37490400-37507000	Strong transcription	Cortex derived primary cultured neurospheres	brain
27	chr2:37490400-37510800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
28	chr2:37490600-37521000	Strong transcription	Dnd41	blood
29	chr2:37491000-37503200	Strong transcription	Fetal Muscle Leg	muscle
30	chr2:37491000-37512400	Weak transcription	Pancreatic Islets	Pancreatic Islet
31	chr2:37491200-37501600	Strong transcription	Monocytes-CD14+_RO01746	blood
32	chr2:37491200-37503600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr2:37491200-37510200	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr2:37491200-37510200	Strong transcription	Primary T helper cells fromperipheralblood	blood
35	chr2:37491600-37503000	Strong transcription	Fetal Thymus	thymus
36	chr2:37491800-37501600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr2:37491800-37502600	Strong transcription	Primary T cells fromperipheralblood	blood
38	chr2:37491800-37503400	Strong transcription	Fetal Intestine Large	intestine
39	chr2:37491800-37509400	Strong transcription	Osteobl	bone
40	chr2:37492000-37503600	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr2:37492000-37507000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr2:37492000-37509600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr2:37492000-37510800	Strong transcription	Primary B cells from peripheral blood	blood
44	chr2:37492000-37511200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
45	chr2:37492200-37502000	Strong transcription	Fetal Lung	lung
46	chr2:37492400-37510000	Weak transcription	Fetal Heart	heart
47	chr2:37492800-37511200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
48	chr2:37493200-37508000	Weak transcription	NHLF	lung
49	chr2:37493400-37502800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
50	chr2:37494000-37510200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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