The 2.0 version of rSNPBase

Variant report

Variant rs3775656
Chromosome Location chr4:143051122-143051123
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
3 chr4:143010400-143057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:143018800-143109600 Weak transcription Fetal Muscle Trunk muscle
5 chr4:143025400-143066800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr4:143030000-143057000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr4:143031000-143064800 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr4:143034000-143061600 Weak transcription Muscle Satellite Cultured Cells --
9 chr4:143039200-143059000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr4:143042200-143051400 Weak transcription Aorta Aorta
11 chr4:143042200-143060200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr4:143042600-143051600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:143043400-143089000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr4:143043600-143056600 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr4:143043800-143054000 Weak transcription Psoas Muscle Psoas
16 chr4:143045800-143057200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:143046000-143051400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr4:143046000-143051600 Weak transcription NHEK skin
19 chr4:143046400-143051400 Weak transcription Primary T cells from cord blood blood
20 chr4:143046400-143052200 Weak transcription Primary T cells fromperipheralblood blood
21 chr4:143046400-143054600 Weak transcription HSMM muscle
22 chr4:143046800-143057200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr4:143047200-143051200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:143049400-143051400 Enhancers HUVEC blood vessel
25 chr4:143049400-143051800 Enhancers Skeletal Muscle Male skeletal muscle
26 chr4:143049400-143052200 Enhancers Fetal Heart heart
27 chr4:143049600-143052600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:143049600-143057200 Weak transcription Lung lung
29 chr4:143049800-143051800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr4:143049800-143052000 Enhancers Colon Smooth Muscle Colon
31 chr4:143049800-143052400 Enhancers Primary T helper naive cells from peripheral blood blood
32 chr4:143049800-143052400 Enhancers Primary T helper naive cells fromperipheralblood blood
33 chr4:143049800-143053000 Enhancers Primary T helper cells PMA-I stimulated --
34 chr4:143049800-143055600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
35 chr4:143049800-143114400 Weak transcription Right Ventricle heart
36 chr4:143050000-143051200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr4:143050000-143051800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr4:143050000-143052400 Enhancers Stomach Smooth Muscle stomach
39 chr4:143050000-143056600 Weak transcription Fetal Muscle Leg muscle
40 chr4:143050000-143079600 Weak transcription NHDF-Ad bronchial
41 chr4:143050200-143051200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr4:143050200-143051400 Weak transcription Rectal Smooth Muscle rectum
43 chr4:143050200-143052400 Enhancers Primary T killer memory cells from peripheral blood blood
44 chr4:143050200-143056200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr4:143050200-143061000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr4:143050400-143051600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr4:143050400-143053400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr4:143050400-143055000 Enhancers Primary T helper cells fromperipheralblood blood
49 chr4:143050400-143056600 Weak transcription HSMMtube muscle
50 chr4:143050400-143062400 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015