Variant report

Variant	rs377572762
Chromosome Location	chr8:9954389-9954390
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916493	chr8:9806580-10029482	Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv610263	chr8:9941021-10090149	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv1034343	chr8:9948342-10014155	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv831230	chr8:9953343-10139350	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9952000-9959400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:9952600-9955200	Active TSS	Brain Anterior Caudate	brain
3	chr8:9952600-9955200	Active TSS	Brain Hippocampus Middle	brain
4	chr8:9952600-9956800	Active TSS	Fetal Brain Female	brain
5	chr8:9952800-9955000	Active TSS	Brain Cingulate Gyrus	brain
6	chr8:9952800-9955000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
7	chr8:9952800-9955400	Active TSS	Brain Angular Gyrus	brain
8	chr8:9952800-9955400	Active TSS	NH-A	brain
9	chr8:9952800-9955800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr8:9953000-9955000	Active TSS	Brain Substantia Nigra	brain
11	chr8:9953000-9955200	Active TSS	Brain Inferior Temporal Lobe	brain
12	chr8:9953200-9955200	Active TSS	Cortex derived primary cultured neurospheres	brain
13	chr8:9953200-9955800	Active TSS	Brain Germinal Matrix	brain
14	chr8:9954000-9956200	Active TSS	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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