Variant report

Variant	rs3784095
Chromosome Location	chr14:68723484-68723485
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:22)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:68722518..68726023-chr14:68727697..68732553,5	K562	blood:
2	chr14:68722161..68724072-chr14:68736475..68738082,2	MCF-7	breast:
3	chr14:68722095..68724487-chr14:68852998..68855587,2	MCF-7	breast:
4	chr14:68722155..68724200-chr14:69282010..69284699,2	MCF-7	breast:
5	chr14:68718502..68724365-chr14:68724697..68730654,11	MCF-7	breast:
6	chr14:68721992..68725773-chr14:68931800..68936275,3	MCF-7	breast:
7	chr14:68606066..68609060-chr14:68720608..68723923,4	MCF-7	breast:
8	chr14:68721740..68724191-chr14:68734621..68736208,2	MCF-7	breast:
9	chr14:68722408..68724336-chr14:69054457..69055958,2	K562	blood:
10	chr14:68708487..68726231-chr14:69250578..69263645,103	MCF-7	breast:
11	chr14:68718999..68725813-chr14:68770906..68776082,15	MCF-7	breast:
12	chr14:68722990..68725291-chr14:68734778..68737297,2	MCF-7	breast:
13	chr14:68712652..68716237-chr14:68722010..68723872,3	MCF-7	breast:
14	chr14:68711091..68724838-chr14:69248065..69264571,70	MCF-7	breast:
15	chr14:68718829..68724499-chr14:68924135..68928480,8	MCF-7	breast:
16	chr14:68406185..68411686-chr14:68720403..68727836,10	MCF-7	breast:
17	chr14:68721166..68724002-chr14:68741604..68744207,2	MCF-7	breast:
18	chr14:68721191..68725230-chr14:68727220..68729721,4	MCF-7	breast:
19	chr14:68604670..68608287-chr14:68720771..68726254,6	MCF-7	breast:
20	chr14:68722033..68724723-chr14:68923948..68925904,2	MCF-7	breast:
21	chr14:68658171..68661273-chr14:68720781..68724443,6	MCF-7	breast:
22	chr14:68721361..68723565-chr14:68729785..68732036,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000182185	Chromatin interaction
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs1958114	0.80[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv428628	chr14:68674504-68835127	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:62 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68707200-68724000	Enhancers	Fetal Lung	lung
2	chr14:68712200-68723600	Enhancers	Fetal Kidney	kidney
3	chr14:68712800-68723600	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr14:68715200-68727200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr14:68717800-68725600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:68718600-68727000	Weak transcription	Stomach Smooth Muscle	stomach
7	chr14:68718600-68727600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr14:68718600-68727800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
9	chr14:68718800-68725400	Weak transcription	Fetal Thymus	thymus
10	chr14:68718800-68730600	Weak transcription	Fetal Intestine Large	intestine
11	chr14:68718800-68730600	Weak transcription	Small Intestine	intestine
12	chr14:68719000-68727400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr14:68719800-68724000	Enhancers	HUES64 Cell Line	embryonic stem cell
14	chr14:68720000-68723800	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr14:68720400-68723600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
16	chr14:68720400-68723800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr14:68720400-68723800	Enhancers	Primary T cells from cord blood	blood
18	chr14:68720400-68724000	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr14:68720600-68723600	Enhancers	Primary T helper cells fromperipheralblood	blood
20	chr14:68720800-68723600	Enhancers	Rectal Smooth Muscle	rectum
21	chr14:68720800-68723600	Enhancers	HepG2	liver
22	chr14:68721000-68724000	Enhancers	Hela-S3	cervix
23	chr14:68721400-68726400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr14:68721400-68727000	Weak transcription	Cortex derived primary cultured neurospheres	brain
25	chr14:68721600-68723600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr14:68721600-68725400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr14:68722200-68727000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
28	chr14:68722200-68727200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
29	chr14:68722400-68739800	Weak transcription	Gastric	stomach
30	chr14:68722600-68723600	Enhancers	HUVEC	blood vessel
31	chr14:68722800-68725400	Weak transcription	GM12878-XiMat	blood
32	chr14:68722800-68727200	Weak transcription	Duodenum Smooth Muscle	Duodenum
33	chr14:68722800-68727600	Weak transcription	Primary B cells from cord blood	blood
34	chr14:68723000-68723600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
35	chr14:68723000-68725400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
36	chr14:68723000-68726400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr14:68723000-68726600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
38	chr14:68723000-68727800	Weak transcription	Colon Smooth Muscle	Colon
39	chr14:68723200-68723600	Enhancers	Pancreatic Islets	Pancreatic Islet
40	chr14:68723200-68725000	Weak transcription	H9 Cell Line	embryonic stem cell
41	chr14:68723200-68725000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr14:68723200-68725000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr14:68723200-68725400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
44	chr14:68723200-68725600	Weak transcription	Primary B cells from peripheral blood	blood
45	chr14:68723200-68728400	Weak transcription	Ovary	ovary
46	chr14:68723400-68724000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
47	chr14:68723400-68724800	Weak transcription	Primary T cells fromperipheralblood	blood
48	chr14:68723400-68725000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr14:68723400-68725000	Weak transcription	Primary T helper cells PMA-I stimulated	--
50	chr14:68723400-68725200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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