Variant report

Variant	rs3784177
Chromosome Location	chr14:32851603-32851604
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs35263553	0.98[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4145677	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32846800-32851800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
2	chr14:32847000-32854000	Weak transcription	Fetal Brain Female	brain
3	chr14:32847600-32852800	Weak transcription	Brain Anterior Caudate	brain
4	chr14:32849000-32867400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr14:32849200-32853000	Weak transcription	Psoas Muscle	Psoas
6	chr14:32849600-32851800	Weak transcription	Brain Cingulate Gyrus	brain
7	chr14:32850800-32854200	Enhancers	NHEK	skin
8	chr14:32850800-32854400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr14:32851000-32851800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr14:32851000-32851800	Enhancers	HMEC	breast
11	chr14:32851000-32852000	Enhancers	Brain Angular Gyrus	brain
12	chr14:32851000-32852000	Enhancers	Stomach Mucosa	stomach
13	chr14:32851000-32854200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr14:32851200-32852000	Enhancers	Brain Substantia Nigra	brain
15	chr14:32851200-32852200	Enhancers	Brain Inferior Temporal Lobe	brain
16	chr14:32851200-32854000	Enhancers	Brain Hippocampus Middle	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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