The 2.0 version of rSNPBase

Variant report

Variant rs3806328
Chromosome Location chr1:220959806-220959807
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220939000-220960400 Weak transcription Small Intestine intestine
2 chr1:220959000-220960200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr1:220959000-220962000 Flanking Active TSS Adipose Nuclei Adipose
4 chr1:220959200-220960000 Flanking Active TSS Fetal Brain Female brain
5 chr1:220959200-220960000 Flanking Active TSS Stomach Smooth Muscle stomach
6 chr1:220959200-220960000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr1:220959200-220960200 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:220959200-220962600 Enhancers Fetal Brain Male brain
9 chr1:220959400-220960000 Flanking Active TSS Primary monocytes fromperipheralblood blood
10 chr1:220959400-220960000 Flanking Active TSS Colonic Mucosa Colon
11 chr1:220959400-220960000 Flanking Active TSS Colon Smooth Muscle Colon
12 chr1:220959400-220960000 Flanking Active TSS Fetal Muscle Leg muscle
13 chr1:220959400-220960000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
14 chr1:220959400-220960000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
15 chr1:220959400-220960000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
16 chr1:220959400-220960200 Flanking Active TSS Duodenum Mucosa Duodenum
17 chr1:220959400-220960200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
18 chr1:220959400-220960200 Flanking Active TSS Fetal Intestine Large intestine
19 chr1:220959400-220960400 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
20 chr1:220959400-220960600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
21 chr1:220959400-220960800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
22 chr1:220959400-220960800 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr1:220959400-220961000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:220959400-220961000 Bivalent Enhancer Primary B cells from peripheral blood blood
25 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:220959400-220961000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
28 chr1:220959400-220961000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:220959400-220961200 Active TSS Brain Anterior Caudate brain
30 chr1:220959400-220961400 Active TSS ES-I3 Cell Line embryonic stem cell
31 chr1:220959400-220961800 Active TSS HUES64 Cell Line embryonic stem cell
32 chr1:220959600-220960000 Flanking Active TSS H1 Cell Line embryonic stem cell
33 chr1:220959600-220960000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr1:220959600-220960000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:220959600-220960000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:220959600-220960000 Flanking Active TSS Liver Liver
37 chr1:220959600-220960000 Flanking Active TSS Brain Hippocampus Middle brain
38 chr1:220959600-220960000 Flanking Active TSS Fetal Intestine Small intestine
39 chr1:220959600-220960000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
40 chr1:220959600-220960000 Bivalent/Poised TSS Fetal Thymus thymus
41 chr1:220959600-220960000 Flanking Active TSS Lung lung
42 chr1:220959600-220960000 Flanking Active TSS Hela-S3 cervix
43 chr1:220959600-220960000 Flanking Active TSS NHLF lung
44 chr1:220959600-220960200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr1:220959600-220960200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
46 chr1:220959600-220960200 Flanking Active TSS Placenta Amnion Placenta Amnion
47 chr1:220959600-220960200 Bivalent/Poised TSS Thymus Thymus
48 chr1:220959600-220960600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:220959600-220960600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:220959600-220960800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015