Variant report

Variant	rs3810175
Chromosome Location	chr19:41904396-41904397
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr19:41902423-41905263	A549	lung:	n/a	chr19:41903346-41903356 chr19:41903242-41903252 chr19:41903244-41903251 chr19:41903241-41903256 chr19:41903347-41903354 chr19:41903243-41903252 chr19:41903346-41903355 chr19:41903349-41903357 chr19:41903346-41903355
2	MXI1	chr19:41902656-41904646	IMR90	lung:	n/a	chr19:41903347-41903356
3	MAZ	chr19:41902804-41904449	IMR90	lung:	n/a	chr19:41903346-41903356 chr19:41903242-41903252 chr19:41903244-41903251 chr19:41903241-41903256 chr19:41903347-41903354 chr19:41903243-41903252 chr19:41903346-41903355 chr19:41903349-41903357 chr19:41903346-41903355
4	TCF12	chr19:41902735-41904415	A549	lung:	n/a	n/a
5	CHD1	chr19:41903046-41904503	GM12878	blood:	n/a	n/a
6	FOSL2	chr19:41902794-41904426	A549	lung:	n/a	n/a
7	MAX	chr19:41902622-41904412	A549	lung:	n/a	chr19:41903346-41903356 chr19:41903242-41903252 chr19:41903244-41903251 chr19:41903241-41903256 chr19:41903347-41903354 chr19:41903243-41903252 chr19:41903346-41903355 chr19:41903349-41903357 chr19:41903346-41903355

No.	Distal block	Cell Line	Cell type
1	chr19:41899828..41905293-chr19:41906916..41917787,16	MCF-7	breast:
2	chr19:41903791..41906982-chr19:41915611..41919642,3	K562	blood:
3	chr19:41767651..41769904-chr19:41902855..41905283,2	K562	blood:
4	chr19:41903201..41905318-chr19:41918567..41921516,2	MCF-7	breast:
5	chr19:41902636..41905103-chr19:41930716..41934044,4	MCF-7	breast:
6	chr19:41855447..41861218-chr19:41901143..41905435,7	MCF-7	breast:
7	chr19:41856174..41858570-chr19:41902142..41904818,3	MCF-7	breast:
8	chr19:41868161..41871707-chr19:41902716..41905358,4	MCF-7	breast:
9	chr19:41901938..41905441-chr19:41944047..41947443,5	K562	blood:
10	chr19:41903473..41906087-chr19:41945278..41947256,2	MCF-7	breast:
11	chr19:41901991..41905119-chr19:41933008..41936084,3	MCF-7	breast:
12	chr19:41855237..41861298-chr19:41901562..41905286,5	K562	blood:
13	chr19:41903342..41904945-chr19:41934241..41936024,2	MCF-7	breast:
14	chr19:41902654..41904815-chr19:41927221..41929015,2	K562	blood:

Variant related genes	Relation type
ENSG00000268987	TF binding region
EXOSC5	TF binding region
ENSG00000123810	Chromatin interaction
ENSG00000268475	Chromatin interaction
ENSG00000142046	Chromatin interaction
ENSG00000255730	Chromatin interaction
ENSG00000105323	Chromatin interaction
ENSG00000248098	Chromatin interaction
ENSG00000105329	Chromatin interaction
ENSG00000177191	Chromatin interaction
ENSG00000105341	Chromatin interaction

Extended variants
information (count: 102 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:102)

rs_ID	r²[population]
rs10409485	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10413735	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10416743	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10417311	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10417997	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10420556	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10422783	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10422956	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10432268	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1043413	0.96[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1046909	0.86[CHD][hapmap]
rs1077856	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10853751	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11083618	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11083619	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11667848	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11667908	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11668924	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11670583	1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11670668	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11670725	0.91[EUR][1000 genomes]
rs11670757	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11880539	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11883104	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12602	0.86[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.83[LWK][hapmap];0.96[MEX][hapmap];0.95[TSI][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12709849	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12980966	0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12982607	0.84[ASN][1000 genomes]
rs13344547	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.98[GIH][hapmap];0.87[JPT][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13344563	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13345590	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13346603	0.96[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1473248	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs166925	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16975238	0.92[CEU][hapmap];1.00[CHB][hapmap];0.87[JPT][hapmap];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17318596	1.00[CHB][hapmap];0.93[CHD][hapmap];0.98[GIH][hapmap];0.91[JPT][hapmap];0.83[MEX][hapmap];0.89[TSI][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17318666	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1967333	0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1967334	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2231935	0.80[CEU][hapmap]
rs2231940	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.98[GIH][hapmap];0.87[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2241706	0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2241707	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2241708	0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2241709	0.80[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2241710	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2241711	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2288871	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2304242	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2304243	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap]
rs2317131	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2569400	0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2569754	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs284648	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs284649	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs284650	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs284651	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284652	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.91[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284654	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284655	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284656	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs284657	0.87[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs284658	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs284660	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs284661	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.91[TSI][hapmap];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs284662	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.86[MEX][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs284663	1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.87[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3213860	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3213861	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3745290	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.89[TSI][hapmap];0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3745292	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3786553	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3810174	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3816037	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3826713	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4605279	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.93[TSI][hapmap];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4674	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.98[CHD][hapmap];0.98[GIH][hapmap];0.91[JPT][hapmap];0.95[LWK][hapmap];0.83[MEX][hapmap];0.89[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4802116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4802117	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4802118	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4803461	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4803462	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4803463	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4803465	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.98[GIH][hapmap];1.00[JPT][hapmap];0.93[TSI][hapmap];0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4803467	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4803468	0.90[CEU][hapmap];0.90[YRI][hapmap];0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4803469	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55986560	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58961854	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62117461	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62117462	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6508977	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7247332	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7255918	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7258973	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.91[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs8103531	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs8105450	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs8105833	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs878082	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs878083	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs892044	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9304593	0.92[CEU][hapmap];1.00[CHB][hapmap];0.98[GIH][hapmap];0.87[JPT][hapmap];0.89[TSI][hapmap];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs3810175	PHLDB3	cis	parietal	SCAN
rs3810175	B3GNT8	cis	Nerve Tibial	GTEx
rs3810175	BCKDHA	cis	lymphoblastoid	seeQTL
rs3810175	CNFN	cis	lymphoblastoid	seeQTL
rs3810175	ZNF233	cis	cerebellum	SCAN
rs3810175	ATP5SL	cis	lymphoblastoid	seeQTL
rs3810175	MEGF8	cis	parietal	SCAN
rs3810175	BCKDHA	trans	parietal	SCAN
rs3810175	PVR	cis	parietal	SCAN
rs3810175	B3GALT7	cis	multi-tissue	Pritchard
rs3810175	LHB	cis	parietal	SCAN
rs3810175	NOSIP	cis	parietal	SCAN
rs3810175	PSG2	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:41901800-41904400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr19:41902000-41904400	Active TSS	Hela-S3	cervix
3	chr19:41902000-41904600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr19:41902200-41904400	Active TSS	H1 Cell Line	embryonic stem cell
5	chr19:41902200-41904400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr19:41902200-41904400	Active TSS	HSMM	muscle
7	chr19:41902200-41904600	Active TSS	Pancreas	Pancrea
8	chr19:41902200-41904600	Active TSS	GM12878-XiMat	blood
9	chr19:41902200-41904600	Active TSS	K562	blood
10	chr19:41902200-41905200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr19:41902400-41904400	Active TSS	ES-I3 Cell Line	embryonic stem cell
12	chr19:41902400-41904400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr19:41902400-41904400	Active TSS	iPS-15b Cell Line	embryonic stem cell
14	chr19:41902400-41904400	Active TSS	iPS-18 Cell Line	embryonic stem cell
15	chr19:41902400-41904400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr19:41902400-41904400	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr19:41902400-41904400	Active TSS	Brain Cingulate Gyrus	brain
18	chr19:41902400-41904400	Active TSS	Brain Germinal Matrix	brain
19	chr19:41902400-41904400	Active TSS	Colonic Mucosa	Colon
20	chr19:41902400-41904400	Active TSS	Fetal Intestine Small	intestine
21	chr19:41902400-41904400	Active TSS	Fetal Kidney	kidney
22	chr19:41902400-41904400	Active TSS	Right Ventricle	heart
23	chr19:41902400-41904600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr19:41902400-41904600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
25	chr19:41902400-41904600	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr19:41902400-41904600	Active TSS	Fetal Intestine Large	intestine
27	chr19:41902400-41904600	Active TSS	Psoas Muscle	Psoas
28	chr19:41902400-41904800	Active TSS	iPS-20b Cell Line	embryonic stem cell
29	chr19:41902400-41905000	Active TSS	HUES48 Cell Line	embryonic stem cell
30	chr19:41902400-41905000	Active TSS	HUES6 Cell Line	embryonic stem cell
31	chr19:41902400-41905000	Active TSS	Ovary	ovary
32	chr19:41902400-41905200	Active TSS	HUES64 Cell Line	embryonic stem cell
33	chr19:41902600-41904400	Active TSS	Primary T killer memory cells from peripheral blood	blood
34	chr19:41902600-41904400	Active TSS	Brain Hippocampus Middle	brain
35	chr19:41902600-41904400	Active TSS	Esophagus	oesophagus
36	chr19:41902600-41904400	Active TSS	Fetal Brain Female	brain
37	chr19:41902600-41904400	Active TSS	Pancreatic Islets	Pancreatic Islet
38	chr19:41902600-41904400	Active TSS	Right Atrium	heart
39	chr19:41902600-41904400	Active TSS	HSMMtube	muscle
40	chr19:41902600-41904600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr19:41902600-41904600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
42	chr19:41902600-41904600	Active TSS	Breast Myoepithelial Primary Cells	Breast
43	chr19:41902600-41904600	Active TSS	Fetal Muscle Trunk	muscle
44	chr19:41902600-41904600	Active TSS	A549	lung
45	chr19:41902600-41904800	Active TSS	H9 Cell Line	embryonic stem cell
46	chr19:41902800-41904400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
47	chr19:41902800-41904400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr19:41902800-41904400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
49	chr19:41902800-41904400	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr19:41902800-41904400	Active TSS	Brain Inferior Temporal Lobe	brain

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