Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10114474	0.83[JPT][hapmap]
rs10963216	1.00[YRI][hapmap];0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11789011	0.84[EUR][1000 genomes]
rs11790692	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11791082	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11793089	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11794533	0.84[EUR][1000 genomes]
rs11795147	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11998777	1.00[YRI][hapmap]
rs12000449	1.00[YRI][hapmap]
rs12553087	1.00[CEU][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1570782	0.91[CHB][hapmap];0.90[TSI][hapmap]
rs16935912	1.00[CHB][hapmap];0.94[JPT][hapmap]
rs3808692	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3808694	0.92[EUR][1000 genomes]
rs3808696	1.00[CEU][hapmap];0.91[CHB][hapmap];0.85[GIH][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3808701	0.82[EUR][1000 genomes]
rs4515654	1.00[ASW][hapmap];0.85[CEU][hapmap];0.91[CHB][hapmap];0.85[GIH][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.88[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4961584	0.82[EUR][1000 genomes]
rs57136446	0.84[EUR][1000 genomes]
rs6475168	0.83[JPT][hapmap]
rs720269	0.87[CEU][hapmap];0.91[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1016971	chr9:17648242-17720176	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
2	nsv1021022	chr9:17649360-17723730	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	diseases
3	nsv892675	chr9:17694823-17790526	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv466279	chr9:17699981-17726581	Weak transcription Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	diseases
5	nsv613705	chr9:17699981-17726581	Enhancers Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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