Variant report

Variant rs3829489
Chromosome Location chr15:77223256-77223257
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:77221200-77223400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr15:77221600-77223600 Weak transcription Left Ventricle heart
3 chr15:77222200-77223400 Enhancers Fetal Intestine Small intestine
4 chr15:77222400-77223400 Enhancers Fetal Intestine Large intestine
5 chr15:77223000-77223400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr15:77223000-77223400 Enhancers Breast Myoepithelial Primary Cells Breast
7 chr15:77223000-77223400 Enhancers Primary B cells from peripheral blood blood
8 chr15:77223000-77223400 Enhancers Primary T cells fromperipheralblood blood
9 chr15:77223000-77223400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr15:77223000-77223400 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr15:77223000-77223400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
12 chr15:77223000-77223400 Enhancers Primary T helper cells fromperipheralblood blood
13 chr15:77223000-77223400 Enhancers Primary T killer naive cells fromperipheralblood blood
14 chr15:77223000-77223400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:77223000-77223400 Enhancers Aorta Aorta
16 chr15:77223000-77223400 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr15:77223000-77223600 Flanking Active TSS A549 lung
18 chr15:77223000-77223600 Flanking Active TSS K562 blood
19 chr15:77223000-77223800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr15:77223000-77223800 Flanking Active TSS Hela-S3 cervix
21 chr15:77223200-77223400 Enhancers H1 Cell Line embryonic stem cell
22 chr15:77223200-77223400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr15:77223200-77223400 Enhancers HUES48 Cell Line embryonic stem cell
24 chr15:77223200-77223400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
25 chr15:77223200-77223400 Enhancers Primary monocytes fromperipheralblood blood
26 chr15:77223200-77223400 Enhancers Primary neutrophils fromperipheralblood blood
27 chr15:77223200-77223400 Active TSS Primary B cells from cord blood blood
28 chr15:77223200-77223400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
29 chr15:77223200-77223400 Enhancers Primary T killer memory cells from peripheral blood blood
30 chr15:77223200-77223400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr15:77223200-77223400 Enhancers Muscle Satellite Cultured Cells --
32 chr15:77223200-77223400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
33 chr15:77223200-77223400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
34 chr15:77223200-77223400 Enhancers Adipose Nuclei Adipose
35 chr15:77223200-77223400 Enhancers Liver Liver
36 chr15:77223200-77223400 Enhancers Brain Angular Gyrus brain
37 chr15:77223200-77223400 Enhancers Colon Smooth Muscle Colon
38 chr15:77223200-77223400 Active TSS Fetal Brain Male brain
39 chr15:77223200-77223400 Enhancers Fetal Heart heart
40 chr15:77223200-77223400 Enhancers Fetal Kidney kidney
41 chr15:77223200-77223400 Enhancers Pancreatic Islets Pancreatic Islet
42 chr15:77223200-77223400 Enhancers Fetal Stomach stomach
43 chr15:77223200-77223400 Active TSS Skeletal Muscle Female skeletal muscle
44 chr15:77223200-77223400 Enhancers Stomach Mucosa stomach
45 chr15:77223200-77223400 Enhancers HMEC breast
46 chr15:77223200-77223400 Active TSS HUVEC blood vessel
47 chr15:77223200-77223600 Flanking Active TSS HUES6 Cell Line embryonic stem cell
48 chr15:77223200-77223600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
49 chr15:77223200-77223600 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
50 chr15:77223200-77223600 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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