Variant report

Variant rs38462
Chromosome Location chr7:30583652-30583653
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30545000-30584600 Weak transcription Aorta Aorta
2 chr7:30545200-30587600 Weak transcription HSMMtube muscle
3 chr7:30545600-30586200 Weak transcription Brain Anterior Caudate brain
4 chr7:30554400-30596400 Weak transcription Fetal Brain Female brain
5 chr7:30554800-30588600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr7:30555200-30590800 Weak transcription Spleen Spleen
7 chr7:30560400-30590800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr7:30560600-30588200 Weak transcription Brain Inferior Temporal Lobe brain
9 chr7:30560800-30586400 Weak transcription Primary B cells from cord blood blood
10 chr7:30560800-30587600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr7:30560800-30588400 Weak transcription Brain Substantia Nigra brain
12 chr7:30561000-30584600 Weak transcription Ovary ovary
13 chr7:30561200-30590400 Weak transcription Muscle Satellite Cultured Cells --
14 chr7:30561200-30590600 Weak transcription Right Ventricle heart
15 chr7:30561400-30585200 Weak transcription Fetal Lung lung
16 chr7:30561600-30586000 Weak transcription Left Ventricle heart
17 chr7:30561600-30586000 Weak transcription Lung lung
18 chr7:30561600-30586200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr7:30561600-30590600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr7:30561600-30606400 Weak transcription Rectal Smooth Muscle rectum
21 chr7:30561800-30585000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr7:30563000-30599800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr7:30563600-30588800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr7:30564400-30590600 Weak transcription Liver Liver
25 chr7:30564400-30612200 Weak transcription Colon Smooth Muscle Colon
26 chr7:30565800-30585000 Weak transcription Duodenum Mucosa Duodenum
27 chr7:30565800-30586200 Weak transcription Brain Angular Gyrus brain
28 chr7:30566000-30588600 Weak transcription Stomach Mucosa stomach
29 chr7:30568400-30583800 Weak transcription Fetal Intestine Large intestine
30 chr7:30569000-30602600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr7:30571200-30588400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr7:30572400-30590800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr7:30573000-30588600 Weak transcription Psoas Muscle Psoas
34 chr7:30573000-30590400 Weak transcription HSMM muscle
35 chr7:30573000-30590600 Weak transcription Primary B cells from peripheral blood blood
36 chr7:30573200-30585800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr7:30573800-30588400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr7:30574000-30584400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr7:30574200-30590600 Weak transcription GM12878-XiMat blood
40 chr7:30574800-30587200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr7:30574800-30601000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr7:30575000-30585200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr7:30575000-30588400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr7:30575200-30588400 Weak transcription Brain Cingulate Gyrus brain
45 chr7:30575600-30590600 Weak transcription Thymus Thymus
46 chr7:30575600-30600000 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr7:30576000-30585000 Weak transcription Fetal Heart heart
48 chr7:30577000-30584800 Weak transcription Stomach Smooth Muscle stomach
49 chr7:30577000-30589400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr7:30577200-30585400 Weak transcription Primary T cells fromperipheralblood blood

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