The 2.0 version of rSNPBase

Variant report

Variant rs38485
Chromosome Location chr7:30610211-30610212
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30564400-30612200 Weak transcription Colon Smooth Muscle Colon
2 chr7:30586600-30620400 Weak transcription Fetal Thymus thymus
3 chr7:30591200-30612400 Weak transcription Brain Germinal Matrix brain
4 chr7:30591200-30633400 Weak transcription Psoas Muscle Psoas
5 chr7:30596600-30614400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr7:30597400-30633200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr7:30597600-30624400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr7:30598400-30623600 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr7:30599400-30617400 Weak transcription Placenta Amnion Placenta Amnion
10 chr7:30601800-30612000 Weak transcription Aorta Aorta
11 chr7:30601800-30633000 Weak transcription Hela-S3 cervix
12 chr7:30602800-30615400 Weak transcription Fetal Brain Female brain
13 chr7:30602800-30616200 Weak transcription Fetal Brain Male brain
14 chr7:30603200-30621000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr7:30603200-30628400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr7:30603600-30612600 Weak transcription Colonic Mucosa Colon
17 chr7:30603800-30612200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr7:30604000-30610600 Weak transcription HMEC breast
19 chr7:30604000-30612200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr7:30604000-30612400 Weak transcription Primary T killer memory cells from peripheral blood blood
21 chr7:30604000-30612800 Weak transcription Brain Inferior Temporal Lobe brain
22 chr7:30604000-30613000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr7:30604000-30613600 Weak transcription Muscle Satellite Cultured Cells --
24 chr7:30604000-30615000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr7:30604000-30615200 Weak transcription HepG2 liver
26 chr7:30604000-30615200 Weak transcription NHEK skin
27 chr7:30604000-30615400 Weak transcription NHDF-Ad bronchial
28 chr7:30604200-30613400 Weak transcription HUVEC blood vessel
29 chr7:30604400-30612000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr7:30604600-30617800 Weak transcription Right Ventricle heart
31 chr7:30604600-30624400 Weak transcription Gastric stomach
32 chr7:30605600-30628200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr7:30606200-30611000 Strong transcription Skeletal Muscle Female skeletal muscle
34 chr7:30607000-30614400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr7:30607000-30617400 Weak transcription Esophagus oesophagus
36 chr7:30607000-30617600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr7:30607000-30633400 Weak transcription Fetal Kidney kidney
38 chr7:30607200-30612000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr7:30607400-30610600 Strong transcription Brain Cingulate Gyrus brain
40 chr7:30607400-30612000 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr7:30607600-30612400 Weak transcription Ovary ovary
42 chr7:30607600-30617400 Weak transcription Brain Angular Gyrus brain
43 chr7:30608200-30612000 Weak transcription Brain Hippocampus Middle brain
44 chr7:30608200-30612200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr7:30608200-30617400 Weak transcription NHLF lung
46 chr7:30608200-30618400 Weak transcription Brain Substantia Nigra brain
47 chr7:30608400-30612000 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr7:30608400-30612000 Weak transcription Fetal Stomach stomach
49 chr7:30608400-30612200 Weak transcription Left Ventricle heart
50 chr7:30608400-30612200 Weak transcription Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015