Variant report

Variant rs38494
Chromosome Location chr7:30625161-30625162
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:30591200-30633400 Weak transcription Psoas Muscle Psoas
2 chr7:30597400-30633200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr7:30601800-30633000 Weak transcription Hela-S3 cervix
4 chr7:30603200-30628400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr7:30605600-30628200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr7:30607000-30633400 Weak transcription Fetal Kidney kidney
7 chr7:30612200-30625600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr7:30612200-30627000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr7:30612800-30628600 Weak transcription Stomach Mucosa stomach
10 chr7:30614000-30633200 Weak transcription HUVEC blood vessel
11 chr7:30615600-30633200 Weak transcription Brain Germinal Matrix brain
12 chr7:30615600-30633400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr7:30615800-30627000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr7:30616000-30625400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr7:30616200-30627800 Strong transcription Primary T cells from cord blood blood
16 chr7:30616600-30625400 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr7:30616800-30625600 Strong transcription Liver Liver
18 chr7:30617200-30625800 Strong transcription Fetal Muscle Trunk muscle
19 chr7:30617200-30626000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr7:30617200-30626000 Strong transcription Primary T helper cells fromperipheralblood blood
21 chr7:30617200-30627200 Strong transcription Primary T cells fromperipheralblood blood
22 chr7:30617400-30625600 Strong transcription Fetal Intestine Large intestine
23 chr7:30617400-30626000 Strong transcription Primary T helper cells PMA-I stimulated --
24 chr7:30617600-30626400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr7:30618000-30633400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr7:30618000-30633400 Weak transcription Esophagus oesophagus
27 chr7:30618400-30633400 Weak transcription Fetal Brain Male brain
28 chr7:30618800-30633400 Weak transcription Brain Substantia Nigra brain
29 chr7:30618800-30633400 Weak transcription Colonic Mucosa Colon
30 chr7:30619200-30632400 Weak transcription Placenta Amnion Placenta Amnion
31 chr7:30619200-30633200 Weak transcription NHLF lung
32 chr7:30619200-30633400 Weak transcription Small Intestine intestine
33 chr7:30619400-30625200 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr7:30619400-30627000 Strong transcription Cortex derived primary cultured neurospheres brain
35 chr7:30620200-30625400 Strong transcription Placenta Placenta
36 chr7:30620400-30625400 Strong transcription Primary T regulatory cells fromperipheralblood blood
37 chr7:30620400-30625600 Strong transcription Adipose Nuclei Adipose
38 chr7:30620600-30625600 Strong transcription Primary B cells from peripheral blood blood
39 chr7:30620600-30633400 Weak transcription Pancreas Pancrea
40 chr7:30620800-30625200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr7:30620800-30625800 Strong transcription Osteobl bone
42 chr7:30621000-30628000 Strong transcription Primary B cells from cord blood blood
43 chr7:30621200-30625600 Strong transcription Primary monocytes fromperipheralblood blood
44 chr7:30621200-30627400 Strong transcription Primary hematopoietic stem cells short term culture blood
45 chr7:30621400-30626400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr7:30622000-30626800 Weak transcription GM12878-XiMat blood
47 chr7:30622200-30625200 Strong transcription Fetal Muscle Leg muscle
48 chr7:30622400-30626200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr7:30622600-30633400 Weak transcription NH-A brain
50 chr7:30622800-30625400 Strong transcription Brain Hippocampus Middle brain

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