Variant report

Variant rs3851273
Chromosome Location chr1:92589511-92589512
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92552400-92595200 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:92552600-92590000 Weak transcription Brain Angular Gyrus brain
3 chr1:92552600-92591600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:92552600-92613400 Weak transcription Stomach Smooth Muscle stomach
5 chr1:92552800-92613600 Weak transcription Breast Myoepithelial Primary Cells Breast
6 chr1:92555200-92620400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr1:92556000-92613600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr1:92556600-92613400 Weak transcription Fetal Brain Female brain
9 chr1:92557400-92598000 Weak transcription Spleen Spleen
10 chr1:92558000-92604000 Weak transcription Left Ventricle heart
11 chr1:92560000-92613600 Weak transcription Brain Anterior Caudate brain
12 chr1:92560600-92590800 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:92561200-92619600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:92561600-92590000 Weak transcription Brain Substantia Nigra brain
15 chr1:92567200-92624200 Weak transcription Fetal Stomach stomach
16 chr1:92567400-92618000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:92568200-92616400 Weak transcription Colon Smooth Muscle Colon
18 chr1:92569400-92595600 Weak transcription Brain Germinal Matrix brain
19 chr1:92569800-92613600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:92570000-92619600 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:92570800-92594800 Weak transcription Fetal Intestine Large intestine
22 chr1:92571800-92601600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:92571800-92613400 Weak transcription Dnd41 blood
24 chr1:92572000-92613400 Weak transcription Brain Hippocampus Middle brain
25 chr1:92574000-92613400 Weak transcription Fetal Lung lung
26 chr1:92576200-92595800 Weak transcription Adipose Nuclei Adipose
27 chr1:92580800-92590800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:92580800-92595200 Weak transcription Ovary ovary
29 chr1:92580800-92615200 Weak transcription Lung lung
30 chr1:92580800-92619000 Weak transcription Pancreas Pancrea
31 chr1:92581000-92590800 Weak transcription Aorta Aorta
32 chr1:92581400-92597200 Weak transcription Fetal Intestine Small intestine
33 chr1:92581400-92613600 Weak transcription Liver Liver
34 chr1:92586000-92613400 Weak transcription Esophagus oesophagus
35 chr1:92586400-92601600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:92588600-92591600 Enhancers Primary T cells from cord blood blood
37 chr1:92589000-92589800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr1:92589400-92589600 Enhancers Fetal Muscle Leg muscle
39 chr1:92589400-92589800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:92589400-92589800 Enhancers HUVEC blood vessel
41 chr1:92589400-92590000 Enhancers Primary T helper cells PMA-I stimulated --
42 chr1:92589400-92590000 Enhancers Primary T helper cells fromperipheralblood blood
43 chr1:92589400-92590000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:92589400-92591200 Enhancers Primary hematopoietic stem cells blood

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