The 2.0 version of rSNPBase

Variant report

Variant rs3862900
Chromosome Location chr1:76753337-76753338
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:76745600-76761000 Weak transcription Aorta Aorta
2 chr1:76745800-76755400 Weak transcription Fetal Lung lung
3 chr1:76747400-76756200 Weak transcription H1 Cell Line embryonic stem cell
4 chr1:76747600-76756400 Weak transcription Fetal Brain Male brain
5 chr1:76747600-76757000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:76747800-76756200 Weak transcription Brain Hippocampus Middle brain
7 chr1:76747800-76756400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:76749200-76760000 Enhancers Primary T cells from cord blood blood
9 chr1:76750200-76760200 Enhancers Primary T helper cells fromperipheralblood blood
10 chr1:76750400-76757200 Enhancers Fetal Thymus thymus
11 chr1:76750400-76760200 Enhancers Primary T helper naive cells from peripheral blood blood
12 chr1:76750400-76760600 Enhancers Primary T helper cells PMA-I stimulated --
13 chr1:76750400-76762000 Enhancers Primary T helper naive cells fromperipheralblood blood
14 chr1:76750800-76755400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr1:76751000-76755200 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr1:76751000-76756400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:76751200-76755400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:76751800-76757600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:76752000-76755200 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr1:76752200-76754000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr1:76752200-76756000 Weak transcription Primary B cells from cord blood blood
22 chr1:76752400-76753600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr1:76752400-76755000 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr1:76752600-76754000 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:76752600-76754000 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:76752600-76755000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:76752600-76755000 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015