Variant report

Variant	rs388781
Chromosome Location	chr7:101721855-101721856
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:101715723..101719126-chr7:101720326..101723914,4	K562	blood:
2	chr7:101706528..101709517-chr7:101721356..101724154,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs382270	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs391234	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs392438	0.88[CEU][hapmap];1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs401301	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs401966	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs411656	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs421168	0.91[CEU][hapmap];1.00[CHB][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs424478	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs425934	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs436483	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs450854	0.92[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7796231	0.86[EUR][1000 genomes]

No data

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:101707200-101738000	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:101708000-101722800	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr7:101708200-101722000	Weak transcription	NH-A	brain
4	chr7:101708200-101723000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr7:101708200-101765000	Weak transcription	Small Intestine	intestine
6	chr7:101708400-101722800	Weak transcription	Brain Substantia Nigra	brain
7	chr7:101708400-101722800	Weak transcription	Right Atrium	heart
8	chr7:101708400-101726000	Weak transcription	NHEK	skin
9	chr7:101711000-101723200	Weak transcription	Brain Angular Gyrus	brain
10	chr7:101715000-101722800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr7:101715200-101723000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr7:101715200-101723200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:101715200-101723200	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr7:101715200-101725800	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr7:101715200-101728600	Weak transcription	Colonic Mucosa	Colon
16	chr7:101715200-101749800	Weak transcription	Rectal Smooth Muscle	rectum
17	chr7:101715400-101723000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr7:101715400-101723000	Weak transcription	Fetal Lung	lung
19	chr7:101715400-101724000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr7:101715400-101749600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
21	chr7:101715600-101723000	Weak transcription	Brain Hippocampus Middle	brain
22	chr7:101715600-101723000	Weak transcription	Fetal Brain Female	brain
23	chr7:101715600-101723200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr7:101715600-101724200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr7:101715600-101725000	Weak transcription	Ovary	ovary
26	chr7:101715600-101725200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
27	chr7:101715600-101725200	Weak transcription	HSMM	muscle
28	chr7:101715600-101725800	Weak transcription	Adipose Nuclei	Adipose
29	chr7:101715600-101726400	Weak transcription	Primary T helper cells PMA-I stimulated	--
30	chr7:101715600-101728600	Weak transcription	Primary B cells from peripheral blood	blood
31	chr7:101715600-101745200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr7:101715600-101745200	Weak transcription	HSMMtube	muscle
33	chr7:101715800-101722800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr7:101715800-101722800	Weak transcription	Right Ventricle	heart
35	chr7:101715800-101724000	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr7:101715800-101726000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr7:101715800-101732600	Weak transcription	Fetal Kidney	kidney
38	chr7:101715800-101732800	Weak transcription	Aorta	Aorta
39	chr7:101715800-101741000	Weak transcription	Gastric	stomach
40	chr7:101715800-101741200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr7:101716000-101722800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr7:101716000-101722800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
43	chr7:101716000-101725200	Weak transcription	NHLF	lung
44	chr7:101716000-101736600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr7:101716000-101743000	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr7:101716000-101746600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
47	chr7:101716200-101723200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
48	chr7:101716400-101724200	Weak transcription	Osteobl	bone
49	chr7:101716400-101758600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
50	chr7:101717000-101722600	Weak transcription	HepG2	liver

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