Variant report
| Variant | rs3935138 |
|---|---|
| Chromosome Location | chr12:50964494-50964495 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50945200-50965200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 2 | chr12:50948400-50966000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 3 | chr12:50949400-50973600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 4 | chr12:50953400-50965600 | Weak transcription | Primary B cells from cord blood | blood |
| 5 | chr12:50953800-50966000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 6 | chr12:50957200-50965600 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr12:50957600-50969200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 8 | chr12:50958800-50966000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 9 | chr12:50959000-50976800 | Weak transcription | Primary T cells from cord blood | blood |
| 10 | chr12:50959400-50966200 | Weak transcription | K562 | blood |
| 11 | chr12:50959800-50969800 | Enhancers | Liver | Liver |
| 12 | chr12:50961000-50964600 | Enhancers | HepG2 | liver |
| 13 | chr12:50961600-50969400 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 14 | chr12:50961800-50964600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 15 | chr12:50961800-50967000 | Weak transcription | Thymus | Thymus |
| 16 | chr12:50961800-50969600 | Enhancers | Adipose Nuclei | Adipose |
| 17 | chr12:50961800-50971200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 18 | chr12:50962000-50966600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 19 | chr12:50962000-50968400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 20 | chr12:50962200-50965800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 21 | chr12:50962200-50966600 | Weak transcription | Fetal Intestine Large | intestine |
| 22 | chr12:50962200-50966600 | Weak transcription | Right Ventricle | heart |
| 23 | chr12:50962200-50968200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 24 | chr12:50962200-50968200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 25 | chr12:50962200-50968200 | Weak transcription | Esophagus | oesophagus |
| 26 | chr12:50962200-50969200 | Weak transcription | Lung | lung |
| 27 | chr12:50962400-50964600 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 28 | chr12:50962400-50964600 | Enhancers | Brain Hippocampus Middle | brain |
| 29 | chr12:50962400-50965600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 30 | chr12:50962400-50965600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 31 | chr12:50962400-50965600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 32 | chr12:50962400-50965600 | Weak transcription | GM12878-XiMat | blood |
| 33 | chr12:50962400-50965800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 34 | chr12:50962400-50966200 | Weak transcription | Fetal Intestine Small | intestine |
| 35 | chr12:50962400-50966200 | Weak transcription | Spleen | Spleen |
| 36 | chr12:50962400-50966600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr12:50962400-50966600 | Weak transcription | Aorta | Aorta |
| 38 | chr12:50962400-50966600 | Weak transcription | Fetal Brain Male | brain |
| 39 | chr12:50962400-50966600 | Weak transcription | Gastric | stomach |
| 40 | chr12:50962400-50966600 | Weak transcription | Left Ventricle | heart |
| 41 | chr12:50962400-50966600 | Weak transcription | Pancreas | Pancrea |
| 42 | chr12:50962400-50966800 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 43 | chr12:50962400-50968200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 44 | chr12:50962400-50973600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 45 | chr12:50962400-50983200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 46 | chr12:50962600-50965600 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 47 | chr12:50962600-50965600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 48 | chr12:50962800-50965600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 49 | chr12:50962800-50966000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 50 | chr12:50963000-50964800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
