Variant report

Variant	rs4072437
Chromosome Location	chr1:211226113-211226114
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1338348	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs17017120	0.82[AMR][1000 genomes]
rs17017167	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17017172	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17017197	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17017204	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17017208	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4951494	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4951496	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4951501	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4951503	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4951703	0.82[AMR][1000 genomes]
rs4951705	0.82[AMR][1000 genomes]
rs4951714	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4951715	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6671566	1.00[CEU][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211210800-211228600	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211221000-211228400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr1:211222800-211228800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr1:211224600-211227200	Strong transcription	HSMM	muscle
6	chr1:211224600-211242200	Weak transcription	A549	lung
7	chr1:211225600-211227200	Strong transcription	HSMMtube	muscle
8	chr1:211225800-211232400	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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