The 2.0 version of rSNPBase

Variant report

Variant rs409419
Chromosome Location chr7:101795994-101795995
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101760200-101796000 Weak transcription Rectal Smooth Muscle rectum
2 chr7:101765200-101801200 Weak transcription Pancreas Pancrea
3 chr7:101765600-101801000 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr7:101766000-101796000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr7:101766000-101796000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr7:101766000-101796000 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr7:101766200-101796000 Weak transcription Esophagus oesophagus
8 chr7:101766200-101796600 Weak transcription Brain Germinal Matrix brain
9 chr7:101771400-101796600 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr7:101772000-101796800 Weak transcription Liver Liver
11 chr7:101772000-101801600 Weak transcription Duodenum Mucosa Duodenum
12 chr7:101773600-101801200 Weak transcription Aorta Aorta
13 chr7:101773800-101796000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr7:101774200-101801200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr7:101777400-101812800 Weak transcription Fetal Lung lung
16 chr7:101777800-101796600 Weak transcription NHLF lung
17 chr7:101778200-101796600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr7:101778400-101796000 Weak transcription NH-A brain
19 chr7:101778400-101812000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr7:101779200-101796000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr7:101782000-101797600 Weak transcription Fetal Brain Female brain
22 chr7:101782800-101803400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr7:101784400-101796600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr7:101784800-101796200 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr7:101784800-101801400 Weak transcription Primary T cells fromperipheralblood blood
26 chr7:101784800-101801600 Weak transcription Adipose Nuclei Adipose
27 chr7:101784800-101814400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr7:101784800-101821600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr7:101784800-101822600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr7:101785000-101796200 Weak transcription Primary hematopoietic stem cells blood
31 chr7:101785000-101796400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr7:101785200-101796600 Weak transcription Primary B cells from peripheral blood blood
33 chr7:101785400-101796000 Weak transcription Primary B cells from cord blood blood
34 chr7:101785800-101796000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr7:101786800-101796000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr7:101788800-101801200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr7:101789600-101796000 Weak transcription Right Atrium heart
38 chr7:101789800-101812800 Weak transcription Brain Angular Gyrus brain
39 chr7:101790400-101796000 Weak transcription GM12878-XiMat blood
40 chr7:101790400-101796200 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr7:101790600-101811400 Weak transcription Brain Substantia Nigra brain
42 chr7:101790800-101796000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr7:101790800-101796000 Weak transcription Primary monocytes fromperipheralblood blood
44 chr7:101790800-101796400 Weak transcription Muscle Satellite Cultured Cells --
45 chr7:101790800-101796400 Weak transcription Spleen Spleen
46 chr7:101790800-101806600 Weak transcription Psoas Muscle Psoas
47 chr7:101790800-101811800 Weak transcription Osteobl bone
48 chr7:101790800-101812600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr7:101791000-101796200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr7:101791000-101801800 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015