The 2.0 version of rSNPBase

Variant report

Variant rs41308435
Chromosome Location chr1:215808022-215808023
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:215741800-215809800 Weak transcription Colonic Mucosa Colon
2 chr1:215750200-215809200 Weak transcription Gastric stomach
3 chr1:215786600-215809400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:215787200-215810200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:215792400-215810200 Weak transcription Aorta Aorta
6 chr1:215792600-215809800 Weak transcription Pancreas Pancrea
7 chr1:215794400-215810000 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:215794600-215808600 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr1:215794600-215809600 Weak transcription H1 Cell Line embryonic stem cell
10 chr1:215794800-215809400 Weak transcription Placenta Placenta
11 chr1:215795800-215809600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:215796000-215809600 Weak transcription Fetal Lung lung
13 chr1:215797000-215809600 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:215797400-215809400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:215797600-215809400 Weak transcription Osteobl bone
16 chr1:215797800-215810200 Weak transcription Left Ventricle heart
17 chr1:215798000-215809400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr1:215800000-215809400 Weak transcription NHDF-Ad bronchial
19 chr1:215805000-215809600 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:215805000-215809800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr1:215805000-215811000 Enhancers Fetal Intestine Large intestine
22 chr1:215805200-215809000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:215805200-215809400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr1:215805200-215809600 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:215805200-215809800 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:215805200-215809800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:215805200-215809800 Weak transcription Esophagus oesophagus
28 chr1:215805400-215809200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr1:215805400-215809400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:215805400-215809400 Weak transcription NHEK skin
31 chr1:215805600-215809600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:215806000-215813600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr1:215807400-215808600 Genic enhancers Liver Liver
34 chr1:215807600-215808800 Enhancers Stomach Mucosa stomach
35 chr1:215807600-215811000 Enhancers Fetal Intestine Small intestine
36 chr1:215807800-215809400 Enhancers HepG2 liver
37 chr1:215808000-215809800 Enhancers Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015