Variant report

Variant	rs4131017
Chromosome Location	chr7:104297472-104297473
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:104296839..104298758-chr7:104300188..104302569,2	K562	blood:

Extended variants
information (count: 46 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs10246540	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs10272959	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs10277884	1.00[CEU][hapmap]
rs10953443	0.82[JPT][hapmap]
rs11761636	0.90[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11766478	1.00[YRI][hapmap]
rs11773248	0.92[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11773444	1.00[CEU][hapmap]
rs11977439	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11983223	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12705266	0.82[JPT][hapmap]
rs1465342	0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs16870065	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs17139105	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs17139109	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs17139166	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs17139722	0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs17139736	0.90[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs17141055	0.82[JPT][hapmap]
rs17141299	0.82[JPT][hapmap]
rs17490468	1.00[YRI][hapmap]
rs17490586	1.00[YRI][hapmap]
rs2193198	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193200	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs2193205	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs2193212	0.83[CHB][hapmap];1.00[JPT][hapmap];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2193214	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs2385247	0.84[JPT][hapmap]
rs2385248	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs2385254	0.92[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs35022976	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3919550	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs4317508	1.00[YRI][hapmap]
rs4357228	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4612275	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs59929156	0.89[EUR][1000 genomes]
rs6944590	0.92[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6948948	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs6967399	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs73181816	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs73181817	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs759533	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs7784639	0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7805947	0.83[CHB][hapmap];1.00[JPT][hapmap]
rs929661	0.83[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024532	chr7:104281393-104299847	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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