Variant report

Variant rs413778
Chromosome Location chr17:43716885-43716886
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43698200-43719000 Weak transcription K562 blood
2 chr17:43698800-43719000 Weak transcription NHLF lung
3 chr17:43699800-43722000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr17:43702200-43717800 Strong transcription Fetal Stomach stomach
5 chr17:43703400-43717000 Strong transcription iPS-20b Cell Line embryonic stem cell
6 chr17:43703400-43718000 Strong transcription Fetal Intestine Small intestine
7 chr17:43703600-43717200 Strong transcription iPS-18 Cell Line embryonic stem cell
8 chr17:43704400-43717800 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr17:43705400-43717000 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr17:43705400-43717600 Strong transcription Primary T cells from cord blood blood
11 chr17:43706200-43717800 Weak transcription Stomach Mucosa stomach
12 chr17:43706800-43717000 Strong transcription HUES48 Cell Line embryonic stem cell
13 chr17:43707000-43717000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr17:43708400-43717800 Weak transcription Small Intestine intestine
15 chr17:43708400-43718600 Weak transcription Aorta Aorta
16 chr17:43708600-43717600 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr17:43708600-43718600 Weak transcription Right Ventricle heart
18 chr17:43708600-43719000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr17:43708800-43718800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr17:43708800-43719000 Weak transcription Colon Smooth Muscle Colon
21 chr17:43708800-43719600 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr17:43708800-43719800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr17:43708800-43721400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr17:43708800-43723800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr17:43708800-43726200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr17:43709000-43717400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr17:43709000-43718800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr17:43709600-43718600 Weak transcription Fetal Lung lung
29 chr17:43709600-43719800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr17:43709600-43720200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr17:43709800-43717600 Weak transcription GM12878-XiMat blood
32 chr17:43709800-43720800 Weak transcription NHEK skin
33 chr17:43709800-43723600 Weak transcription HSMM muscle
34 chr17:43710000-43723800 Weak transcription Brain Cingulate Gyrus brain
35 chr17:43710400-43718600 Weak transcription A549 lung
36 chr17:43710600-43717200 Strong transcription Fetal Brain Female brain
37 chr17:43710600-43717600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr17:43711800-43724000 Weak transcription Brain Angular Gyrus brain
39 chr17:43712000-43717600 Weak transcription Primary T killer memory cells from peripheral blood blood
40 chr17:43713400-43717600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr17:43713600-43717000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr17:43714000-43717400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr17:43714000-43718600 Weak transcription Fetal Kidney kidney
44 chr17:43714000-43719400 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr17:43714000-43720000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr17:43714000-43725000 Weak transcription Fetal Brain Male brain
47 chr17:43714000-43726200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr17:43714200-43719400 Weak transcription Colonic Mucosa Colon
49 chr17:43714200-43727800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr17:43714400-43717600 Weak transcription Primary hematopoietic stem cells blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links