The 2.0 version of rSNPBase

Variant report

Variant rs41438644
Chromosome Location chr1:85843238-85843239
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85834800-85844200 Weak transcription Fetal Muscle Leg muscle
2 chr1:85838600-85843400 Weak transcription Fetal Brain Female brain
3 chr1:85839000-85843600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:85839400-85846400 Weak transcription Small Intestine intestine
5 chr1:85839800-85864200 Weak transcription Aorta Aorta
6 chr1:85840000-85844200 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr1:85840000-85844200 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr1:85840000-85844800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr1:85840000-85844800 Weak transcription Ovary ovary
10 chr1:85840000-85845200 Weak transcription Brain Cingulate Gyrus brain
11 chr1:85840200-85844400 Weak transcription HSMMtube muscle
12 chr1:85840200-85844800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:85840200-85844800 Weak transcription Fetal Stomach stomach
14 chr1:85840200-85845200 Weak transcription HepG2 liver
15 chr1:85840200-85845400 Weak transcription NHLF lung
16 chr1:85840200-85845600 Weak transcription Psoas Muscle Psoas
17 chr1:85840400-85845200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr1:85840400-85845200 Weak transcription HSMM muscle
19 chr1:85840400-85845400 Weak transcription Muscle Satellite Cultured Cells --
20 chr1:85840400-85848000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr1:85841200-85851400 Weak transcription Pancreas Pancrea
22 chr1:85841200-85859800 Weak transcription NH-A brain
23 chr1:85841600-85844800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:85841800-85844800 Weak transcription Brain Anterior Caudate brain
25 chr1:85841800-85845000 Weak transcription Fetal Intestine Small intestine
26 chr1:85841800-85848000 Weak transcription NHDF-Ad bronchial
27 chr1:85842000-85844800 Weak transcription Liver Liver
28 chr1:85842000-85845200 Weak transcription Fetal Lung lung
29 chr1:85842000-85850800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:85842400-85845000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:85842400-85845400 Weak transcription Fetal Kidney kidney
32 chr1:85842400-85847200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr1:85842600-85843600 Enhancers Fetal Brain Male brain
34 chr1:85842600-85844200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:85842600-85846000 Weak transcription Colon Smooth Muscle Colon
36 chr1:85842600-85847800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr1:85842800-85847200 Weak transcription Rectal Smooth Muscle rectum
38 chr1:85842800-85847600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:85843000-85845200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr1:85843200-85845000 Weak transcription Osteobl bone

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015