Variant report
| Variant | rs4144469 |
|---|---|
| Chromosome Location | chr12:49961149-49961150 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49958800-49961200 | Weak transcription | Aorta | Aorta |
| 2 | chr12:49959800-49961200 | Enhancers | Gastric | stomach |
| 3 | chr12:49960000-49961200 | Enhancers | Small Intestine | intestine |
| 4 | chr12:49960200-49961200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 5 | chr12:49960200-49961400 | Transcr. at gene 5' and 3' | Skeletal Muscle Male | skeletal muscle |
| 6 | chr12:49960200-49961600 | Flanking Active TSS | Skeletal Muscle Female | skeletal muscle |
| 7 | chr12:49960200-49963200 | Active TSS | HUES64 Cell Line | embryonic stem cell |
| 8 | chr12:49960400-49961200 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 9 | chr12:49960400-49961200 | Enhancers | Pancreas | Pancrea |
| 10 | chr12:49960400-49961200 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 11 | chr12:49960400-49961200 | Enhancers | Spleen | Spleen |
| 12 | chr12:49960400-49961200 | Flanking Active TSS | Hela-S3 | cervix |
| 13 | chr12:49960400-49961400 | Flanking Active TSS | Brain Angular Gyrus | brain |
| 14 | chr12:49960400-49961400 | Flanking Active TSS | Stomach Smooth Muscle | stomach |
| 15 | chr12:49960400-49961400 | Flanking Active TSS | Dnd41 | blood |
| 16 | chr12:49960400-49961600 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr12:49960400-49961600 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 18 | chr12:49960400-49961600 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 19 | chr12:49960400-49962800 | Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
| 20 | chr12:49960600-49961200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 21 | chr12:49960600-49961200 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 22 | chr12:49960600-49961200 | Flanking Active TSS | Fetal Intestine Small | intestine |
| 23 | chr12:49960600-49961400 | Flanking Active TSS | Primary T killer memory cells from peripheral blood | blood |
| 24 | chr12:49960600-49961400 | Flanking Active TSS | Ganglion Eminence derived primary cultured neurospheres | brain |
| 25 | chr12:49960600-49961400 | Flanking Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 26 | chr12:49960600-49961400 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 27 | chr12:49960600-49961400 | Flanking Active TSS | Rectal Smooth Muscle | rectum |
| 28 | chr12:49960600-49961400 | Flanking Active TSS | Osteobl | bone |
| 29 | chr12:49960600-49961600 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 30 | chr12:49960600-49961600 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 31 | chr12:49960600-49961800 | Flanking Active TSS | Fetal Muscle Trunk | muscle |
| 32 | chr12:49960600-49962800 | Active TSS | Fetal Kidney | kidney |
| 33 | chr12:49960600-49963000 | Active TSS | iPS-20b Cell Line | embryonic stem cell |
| 34 | chr12:49960600-49963200 | Active TSS | HUES6 Cell Line | embryonic stem cell |
| 35 | chr12:49960800-49961200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 36 | chr12:49960800-49961200 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 37 | chr12:49960800-49961200 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr12:49960800-49961200 | Flanking Active TSS | Cortex derived primary cultured neurospheres | brain |
| 39 | chr12:49960800-49961200 | Flanking Active TSS | Brain Inferior Temporal Lobe | brain |
| 40 | chr12:49960800-49961200 | Flanking Active TSS | Colon Smooth Muscle | Colon |
| 41 | chr12:49960800-49961200 | Flanking Active TSS | Duodenum Smooth Muscle | Duodenum |
| 42 | chr12:49960800-49961200 | Flanking Active TSS | Fetal Brain Female | brain |
| 43 | chr12:49960800-49961200 | Flanking Active TSS | Fetal Heart | heart |
| 44 | chr12:49960800-49961400 | Flanking Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 45 | chr12:49960800-49961400 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 46 | chr12:49960800-49961400 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 47 | chr12:49960800-49961400 | Flanking Active TSS | Primary T helper 17 cells PMA-I stimulated | -- |
| 48 | chr12:49960800-49961400 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 49 | chr12:49960800-49961400 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
| 50 | chr12:49960800-49961400 | Flanking Active TSS | Brain Germinal Matrix | brain |
