Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:80164328..80166827-chr16:80167258..80169658,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10514484	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs11647373	0.93[EUR][1000 genomes]
rs11647773	0.93[EUR][1000 genomes]
rs11866315	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs12444152	0.90[EUR][1000 genomes]
rs12926289	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1478503	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1478511	0.90[EUR][1000 genomes]
rs1564217	0.93[EUR][1000 genomes]
rs1600192	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1842021	0.81[AFR][1000 genomes]
rs1975949	0.80[ASN][1000 genomes]
rs2007682	0.81[JPT][hapmap]
rs2009458	0.80[AMR][1000 genomes]
rs4889099	0.91[EUR][1000 genomes]
rs4889105	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs4889106	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4889107	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6564733	0.96[EUR][1000 genomes]
rs6564734	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6564735	0.84[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6564741	0.80[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs7195551	0.82[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7201995	0.89[EUR][1000 genomes]
rs7202741	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7499560	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs8057500	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv906995	chr16:80094975-80166677	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv833298	chr16:80122337-80314603	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	nsv1055982	chr16:80151604-80202923	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80162200-80164800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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