Variant report

Variant	rs4145677
Chromosome Location	chr14:32850583-32850584
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17098938	0.82[AMR][1000 genomes]
rs35263553	0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs3784177	0.83[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32845200-32851000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr14:32846800-32851800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:32847000-32854000	Weak transcription	Fetal Brain Female	brain
4	chr14:32847600-32852800	Weak transcription	Brain Anterior Caudate	brain
5	chr14:32849000-32851200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr14:32849000-32867400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:32849200-32850800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr14:32849200-32851200	Weak transcription	Brain Hippocampus Middle	brain
9	chr14:32849200-32853000	Weak transcription	Psoas Muscle	Psoas
10	chr14:32849600-32850800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr14:32849600-32850800	Weak transcription	NHEK	skin
12	chr14:32849600-32851800	Weak transcription	Brain Cingulate Gyrus	brain
13	chr14:32849800-32851000	Weak transcription	HMEC	breast
14	chr14:32849800-32851200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr14:32850000-32851000	Weak transcription	Brain Angular Gyrus	brain
16	chr14:32850200-32851200	Weak transcription	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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