The 2.0 version of rSNPBase

Variant report

Variant rs4150400
Chromosome Location chr2:128050637-128050638
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128024400-128050800 Strong transcription Fetal Thymus thymus
2 chr2:128036600-128050800 Weak transcription Right Atrium heart
3 chr2:128042200-128051200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr2:128043000-128050800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr2:128044600-128050800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr2:128047400-128051000 Weak transcription Small Intestine intestine
7 chr2:128048600-128050800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr2:128049800-128050800 Genic enhancers Primary T cells fromperipheralblood blood
9 chr2:128049800-128050800 Genic enhancers Primary T helper naive cells from peripheral blood blood
10 chr2:128050000-128050800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:128050000-128050800 Genic enhancers Primary T helper naive cells fromperipheralblood blood
12 chr2:128050000-128050800 Genic enhancers Skeletal Muscle Female skeletal muscle
13 chr2:128050000-128051000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr2:128050000-128051600 Transcr. at gene 5' and 3' Dnd41 blood
15 chr2:128050200-128050800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr2:128050200-128050800 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr2:128050200-128050800 Weak transcription Colonic Mucosa Colon
18 chr2:128050200-128050800 Enhancers Fetal Heart heart
19 chr2:128050200-128050800 Genic enhancers Fetal Muscle Trunk muscle
20 chr2:128050200-128050800 Weak transcription Psoas Muscle Psoas
21 chr2:128050200-128050800 Genic enhancers Skeletal Muscle Male skeletal muscle
22 chr2:128050200-128051000 Genic enhancers Primary B cells from peripheral blood blood
23 chr2:128050200-128051000 Transcr. at gene 5' and 3' Rectal Smooth Muscle rectum
24 chr2:128050200-128051600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
25 chr2:128050400-128050800 Weak transcription H1 Cell Line embryonic stem cell
26 chr2:128050400-128050800 Weak transcription H9 Cell Line embryonic stem cell
27 chr2:128050400-128050800 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
28 chr2:128050400-128050800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr2:128050400-128050800 Weak transcription Primary monocytes fromperipheralblood blood
30 chr2:128050400-128050800 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr2:128050400-128050800 Genic enhancers Primary B cells from cord blood blood
32 chr2:128050400-128050800 Weak transcription Primary hematopoietic stem cells blood
33 chr2:128050400-128050800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr2:128050400-128050800 Genic enhancers Fetal Intestine Small intestine
35 chr2:128050400-128050800 Weak transcription Lung lung
36 chr2:128050400-128050800 Weak transcription Ovary ovary
37 chr2:128050400-128050800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr2:128050400-128050800 Enhancers Stomach Mucosa stomach
39 chr2:128050400-128050800 Weak transcription Spleen Spleen
40 chr2:128050400-128050800 Active TSS GM12878-XiMat blood
41 chr2:128050400-128050800 Flanking Active TSS HepG2 liver
42 chr2:128050400-128050800 Genic enhancers Monocytes-CD14+_RO01746 blood
43 chr2:128050400-128051000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
44 chr2:128050400-128051000 Enhancers Primary T killer naive cells fromperipheralblood blood
45 chr2:128050400-128051000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr2:128050400-128051000 Weak transcription Aorta Aorta
47 chr2:128050400-128051000 Enhancers Gastric stomach
48 chr2:128050400-128051200 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
49 chr2:128050400-128051200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
50 chr2:128050400-128051200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015