Variant report
| Variant | rs41512348 |
|---|---|
| Chromosome Location | chr14:37490517-37490518 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr14:37489207..37490947-chr14:37492261..37494001,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs10134334 | 1.00[TSI][hapmap] |
| rs10483487 | 1.00[TSI][hapmap] |
| rs17106343 | 1.00[TSI][hapmap] |
| rs17106483 | 1.00[TSI][hapmap] |
| rs17767095 | 1.00[AFR][1000 genomes] |
| rs2180094 | 1.00[TSI][hapmap] |
| rs2415387 | 1.00[TSI][hapmap] |
| rs4900688 | 1.00[TSI][hapmap] |
| rs4906569 | 1.00[TSI][hapmap] |
| rs61988051 | 1.00[AFR][1000 genomes] |
| rs7140725 | 1.00[TSI][hapmap] |
| rs7155546 | 1.00[TSI][hapmap] |
| rs8007988 | 1.00[TSI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv534288 | chr14:37254539-37697745 | Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA | 17 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
