Variant report

Variant	rs41530749
Chromosome Location	chr3:25155871-25155872
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs34155045	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs41441147	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56023574	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs56098835	0.88[AMR][1000 genomes]
rs62230277	0.86[AMR][1000 genomes]
rs62230292	0.96[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62230293	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs62230297	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs73047766	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs41530749	TOP2B	cis	parietal	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:25147800-25157600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:25155800-25156400	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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