Variant report

Variant rs416952
Chromosome Location chr5:15808138-15808139
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:15805200-15810400 Weak transcription Aorta Aorta
2 chr5:15805200-15820800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr5:15805400-15808400 Weak transcription Fetal Brain Female brain
4 chr5:15806200-15810000 Enhancers Fetal Heart heart
5 chr5:15806600-15810000 Enhancers Brain Substantia Nigra brain
6 chr5:15806800-15808200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
7 chr5:15806800-15808200 Enhancers Fetal Muscle Trunk muscle
8 chr5:15806800-15808600 Enhancers NHDF-Ad bronchial
9 chr5:15806800-15809000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr5:15806800-15809000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr5:15806800-15809000 Enhancers Adipose Nuclei Adipose
12 chr5:15806800-15809000 Enhancers Brain Angular Gyrus brain
13 chr5:15806800-15809000 Enhancers Right Atrium heart
14 chr5:15806800-15809400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
15 chr5:15806800-15810000 Enhancers Brain Inferior Temporal Lobe brain
16 chr5:15806800-15810400 Enhancers Brain Hippocampus Middle brain
17 chr5:15807200-15808200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr5:15807200-15808400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr5:15807200-15809400 Enhancers Colon Smooth Muscle Colon
20 chr5:15807200-15809400 Enhancers Fetal Muscle Leg muscle
21 chr5:15807400-15808200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
22 chr5:15807400-15808200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:15807400-15808200 Enhancers Breast Myoepithelial Primary Cells Breast
24 chr5:15807400-15808200 Enhancers Skeletal Muscle Female skeletal muscle
25 chr5:15807400-15808200 Enhancers HSMMtube muscle
26 chr5:15807400-15809000 Enhancers HUVEC blood vessel
27 chr5:15807400-15809200 Enhancers Rectal Smooth Muscle rectum
28 chr5:15807400-15809400 Enhancers Brain Cingulate Gyrus brain
29 chr5:15807400-15810000 Enhancers Brain Anterior Caudate brain
30 chr5:15807600-15808200 Enhancers HSMM muscle
31 chr5:15807600-15808200 Weak transcription NHLF lung
32 chr5:15807600-15808400 Enhancers Muscle Satellite Cultured Cells --
33 chr5:15807600-15808600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr5:15807600-15808800 Weak transcription Left Ventricle heart
35 chr5:15807600-15811200 Weak transcription Right Ventricle heart
36 chr5:15807800-15808200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr5:15807800-15809000 Enhancers Stomach Smooth Muscle stomach
38 chr5:15808000-15808400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
39 chr5:15808000-15808800 Enhancers Lung lung
40 chr5:15808000-15809000 Weak transcription Duodenum Smooth Muscle Duodenum

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