Variant report

Variant rs423105
Chromosome Location chr1:85796427-85796428
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85788600-85797400 Weak transcription Fetal Muscle Trunk muscle
2 chr1:85790400-85797000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:85790600-85800000 Enhancers HUVEC blood vessel
4 chr1:85791000-85796800 Enhancers HepG2 liver
5 chr1:85791200-85798000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr1:85791400-85797400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:85792200-85806000 Weak transcription Fetal Kidney kidney
8 chr1:85792600-85797800 Weak transcription Fetal Intestine Small intestine
9 chr1:85792800-85796600 Enhancers HUES48 Cell Line embryonic stem cell
10 chr1:85793000-85797000 Enhancers HMEC breast
11 chr1:85793200-85797000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:85793200-85797600 Enhancers NHEK skin
13 chr1:85793200-85798600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:85793400-85797600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:85793600-85798200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr1:85794000-85796600 Enhancers iPS-20b Cell Line embryonic stem cell
17 chr1:85794000-85797000 Enhancers HUES6 Cell Line embryonic stem cell
18 chr1:85794000-85798200 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr1:85794200-85796600 Enhancers Placenta Placenta
20 chr1:85794200-85798000 Enhancers Fetal Muscle Leg muscle
21 chr1:85794400-85796800 Enhancers HUES64 Cell Line embryonic stem cell
22 chr1:85794400-85797400 Enhancers Fetal Heart heart
23 chr1:85794600-85796600 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr1:85794600-85796800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:85794600-85797600 Enhancers Skeletal Muscle Male skeletal muscle
26 chr1:85794800-85798200 Enhancers Cortex derived primary cultured neurospheres brain
27 chr1:85795000-85796600 Enhancers Brain Hippocampus Middle brain
28 chr1:85795000-85796800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr1:85795000-85798000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:85795200-85798600 Weak transcription Fetal Intestine Large intestine
31 chr1:85795400-85796600 Enhancers Stomach Mucosa stomach
32 chr1:85795400-85797000 Enhancers Placenta Amnion Placenta Amnion
33 chr1:85795600-85796600 Enhancers ES-WA7 Cell Line embryonic stem cell
34 chr1:85795600-85796600 Enhancers H9 Cell Line embryonic stem cell
35 chr1:85795600-85796600 Flanking Active TSS HSMMtube muscle
36 chr1:85795600-85796600 Flanking Active TSS NH-A brain
37 chr1:85795600-85796800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
38 chr1:85795600-85796800 Enhancers Left Ventricle heart
39 chr1:85795600-85796800 Enhancers Right Ventricle heart
40 chr1:85795600-85796800 Enhancers Spleen Spleen
41 chr1:85795600-85796800 Flanking Active TSS NHDF-Ad bronchial
42 chr1:85795600-85797000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:85795600-85797000 Enhancers Brain Germinal Matrix brain
44 chr1:85795600-85797000 Enhancers Right Atrium heart
45 chr1:85795600-85798400 Enhancers Primary B cells from peripheral blood blood
46 chr1:85795800-85796600 Flanking Active TSS Muscle Satellite Cultured Cells --
47 chr1:85795800-85796600 Enhancers Brain Cingulate Gyrus brain
48 chr1:85795800-85796600 Enhancers Duodenum Smooth Muscle Duodenum
49 chr1:85795800-85796600 Flanking Active TSS HSMM muscle
50 chr1:85795800-85796600 Flanking Active TSS NHLF lung

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