Variant report
| Variant | rs4236570 |
|---|---|
| Chromosome Location | chr7:104298113-104298114 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104296839..104298758-chr7:104300188..104302569,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:15)
| rs_ID | r2[population] |
|---|---|
| rs10250078 | 1.00[AMR][1000 genomes] |
| rs1468861 | 1.00[AMR][1000 genomes] |
| rs1861610 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
| rs2193199 | 1.00[AMR][1000 genomes] |
| rs2470962 | 1.00[AMR][1000 genomes] |
| rs4431535 | 1.00[AMR][1000 genomes] |
| rs4623345 | 1.00[AMR][1000 genomes] |
| rs4730033 | 1.00[AMR][1000 genomes] |
| rs4730046 | 1.00[AMR][1000 genomes] |
| rs6944590 | 1.00[AMR][1000 genomes] |
| rs6958342 | 1.00[AMR][1000 genomes] |
| rs6979378 | 1.00[YRI][hapmap] |
| rs7784639 | 1.00[AMR][1000 genomes] |
| rs7801079 | 1.00[AMR][1000 genomes] |
| rs7801340 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1024532 | chr7:104281393-104299847 | Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
