The 2.0 version of rSNPBase

Variant report

Variant rs4238107
Chromosome Location chr12:50998386-50998387
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:50974000-51011800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr12:50979200-51013800 Weak transcription Fetal Stomach stomach
3 chr12:50991400-51006600 Weak transcription Esophagus oesophagus
4 chr12:50991600-51009600 Weak transcription Rectal Smooth Muscle rectum
5 chr12:50991600-51014000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr12:50991800-51003200 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr12:50991800-51003200 Weak transcription Small Intestine intestine
8 chr12:50991800-51006800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr12:50992000-50999000 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr12:50992000-51006600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr12:50992200-51005400 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr12:50992400-50998400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:50992400-51000200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:50992400-51000400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr12:50992400-51001000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr12:50992400-51004200 Weak transcription HSMMtube muscle
17 chr12:50992400-51005400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr12:50992400-51005600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr12:50992400-51006600 Weak transcription Psoas Muscle Psoas
20 chr12:50992400-51007200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr12:50992400-51007400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr12:50992400-51007400 Weak transcription Dnd41 blood
23 chr12:50992400-51009200 Weak transcription Fetal Thymus thymus
24 chr12:50992400-51009600 Weak transcription Thymus Thymus
25 chr12:50992400-51015200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr12:50992600-50999000 Weak transcription NHEK skin
27 chr12:50992800-51006800 Weak transcription HSMM muscle
28 chr12:50992800-51007200 Weak transcription Hela-S3 cervix
29 chr12:50993000-51013800 Weak transcription Primary T cells fromperipheralblood blood
30 chr12:50993000-51013800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
31 chr12:50993200-50999000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr12:50993200-51000600 Weak transcription Right Atrium heart
33 chr12:50993400-50999000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr12:50993400-50999800 Weak transcription Lung lung
35 chr12:50993600-51000600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr12:50993600-51007200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr12:50993600-51013400 Weak transcription GM12878-XiMat blood
38 chr12:50994200-51001000 Weak transcription Fetal Lung lung
39 chr12:50994200-51005800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr12:50994400-51000400 Weak transcription Primary B cells from peripheral blood blood
41 chr12:50994400-51001200 Weak transcription A549 lung
42 chr12:50994400-51001400 Weak transcription Brain Angular Gyrus brain
43 chr12:50994400-51012400 Weak transcription Primary T cells from cord blood blood
44 chr12:50994600-51018600 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr12:50995000-51000400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr12:50995000-51000600 Weak transcription Primary hematopoietic stem cells blood
47 chr12:50995000-51000600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr12:50995200-51005600 Weak transcription Placenta Placenta
49 chr12:50996000-51006600 Weak transcription Primary B cells from cord blood blood
50 chr12:50997000-50998400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015